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View Structure Prediction Details

Protein: gi|24374035, gi|...
Organism: Shewanella oneidensis MR-1
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24374035, gi|....

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
718.0 [0..3] [478..103]
gi|109081748 - gi|109081748|ref|XP_001091427.1| PREDICTED: pyruvate kinase 3 isoform 9 [Macaca mulatta]
717.0 [0..3] [478..103]
gi|33875497 - gi|33875497|gb|AAH00481.2| PKM2 protein [Homo sapiens]
713.0 [0..3] [478..77]
gi|33303751 - gi|33303751|gb|AAQ02389.1| pyruvate kinase, muscle [synthetic construct]
710.0 [0..3] [478..43]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRRTKIVTT LGPATDRDDN LRRIIAAGAN VVRLNFSHGS PEDHLKRATQ AREIAKELGV  60
   61 HVAILGDLQG PKIRVSTFKD NKKIQLKLGQ TYILDAELAK GEGDENQVGI DYKQLPDDVN 120
  121 VGDILMLDDG RVQLRVERVE GRKVHTTVTV AGPLSNNKGI NKQGGGLSAA ALTEKDKADI 180
  181 LTAAMIQVDY LAVSFPRSGA DLEYARSLAQ QAGSNALIVA KVERAEAVAS DEAMDDVILA 240
  241 SDVVMVARGD LGVEIGDAAL VAVQKKLIAR SRQLNKIVIT ATQMMESMIS SPMPTRAEVM 300
  301 DVANAVLDGT DAVMLSAETA AGDFPEETVK AMANVCVGAE SHPSVKVSKH RLDARFTSVE 360
  361 ETIALSTMYA ANHLEGVKAI IALTESGATP KLMSRISSSL PILGLSRHDT TLAKMALYRG 420
  421 VLPIYFDSTI YPADELAQKA LESLTKAGYL HSGDLVLMTK GDAMETIGGT NTCKVLIVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1zjhA
Description: Structure of human muscle pyruvate kinase (PKM2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle