YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24373758, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	134 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24373758, gi|....

Description	E-value	Query Range	Subject Range
gi\|92115045, gi\|... - gi\|92115045\|ref\|YP_574973.1\| diacylglycerol kinase [Chromohalobacter salexigens DSM 3043], gi\|917981...	154.0	[0..12]	[133..1]
gi\|113950705, gi... - gi\|160875000\|ref\|YP_001554316.1\| diacylglycerol kinase [Shewanella baltica OS195], gi\|160860522\|gb\|A...	150.0	[0..9]	[133..45]
gi\|68543795, gi\|... - gi\|68543795\|ref\|ZP_00583486.1\| Prokaryotic diacylglycerol kinase [Shewanella baltica OS155], gi\|6851...	150.0	[0..9]	[133..45]
gi\|114333953, gi... - gi\|114562660\|ref\|YP_750173.1\| diacylglycerol kinase [Shewanella frigidimarina NCIMB 400], gi\|1143339...	146.0	[0..12]	[133..1]
gi\|68547602, gi\|... - gi\|68547602\|ref\|ZP_00587135.1\| Prokaryotic diacylglycerol kinase [Shewanella amazonensis SB2B], gi\|6...	144.0	[0..12]	[133..1]
KDGL_HAEIN - Diacylglycerol kinase OS=Haemophilus influenzae GN=dgkA PE=3 SV=1 KDGL_HAEIN - Diacylglycerol kinase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=dgkA ...	143.0	[0..15]	[130..2]
gi\|144982956 - gi\|144982956\|gb\|EDJ90465.1\| diacylglycerol kinase [Haemophilus influenzae R3021] gi\|148718724, gi... - gi\|148827482\|ref\|YP_001292235.1\| diacylglycerol kinase [Haemophilus influenzae PittGG], gi\|148718724... gi\|148715541, gi... - gi\|148825381\|ref\|YP_001290134.1\| diacylglycerol kinase [Haemophilus influenzae PittEE], gi\|148715541... gi\|145272349, gi... - gi\|145638754\|ref\|ZP_01794363.1\| diacylglycerol kinase [Haemophilus influenzae PittII], gi\|145272349\|... gi\|68057139, gi\|... - gi\|68248940\|ref\|YP_248052.1\| diacylglycerol kinase [Haemophilus influenzae 86-028NP], gi\|68057139\|gb... gi\|145270561, gi... - gi\|145636396\|ref\|ZP_01792065.1\| diacylglycerol kinase [Haemophilus influenzae PittHH], gi\|145270561\|... gi\|229846425, gi... - gi\|229846425\|ref\|ZP_04466533.1\| diacylglycerol kinase [Haemophilus influenzae 7P49H1], gi\|229810518\|... gi\|145268212, gi... - gi\|145634667\|ref\|ZP_01790376.1\| diacylglycerol kinase [Haemophilus influenzae PittAA], gi\|145268212\|... gi\|229844574, gi... - gi\|229844574\|ref\|ZP_04464714.1\| diacylglycerol kinase [Haemophilus influenzae 6P18H1], gi\|229812823\|... gi\|53733210 - gi\|53733210\|ref\|ZP_00156174.2\| COG0818: Diacylglycerol kinase [Haemophilus influenzae R2866] gi\|145632584, gi... - gi\|145632584\|ref\|ZP_01788318.1\| DNA repair protein RecO [Haemophilus influenzae 3655], gi\|144986779\|... gi\|145631419 - gi\|145631419\|ref\|ZP_01787189.1\| diacylglycerol kinase [Haemophilus influenzae 22.4-21] gi\|144979157, gi... - gi\|145628687\|ref\|ZP_01784487.1\| DNA repair protein RecO [Haemophilus influenzae 22.1-21], gi\|1449791...	143.0	[0..15]	[130..2]
gi\|145564537, gi... - gi\|77814676\|ref\|ZP_00813932.1\| Prokaryotic diacylglycerol kinase [Shewanella putrefaciens CN-32], gi... gi\|120559175, gi... - gi\|82743769\|ref\|ZP_00906394.1\| diacylglycerol kinase [Shewanella sp. W3-18-1], gi\|82718870\|gb\|EAP538... gi\|124549362, gi... - gi\|124549362\|ref\|ZP_01707622.1\| diacylglycerol kinase [Shewanella putrefaciens 200], gi\|124507913\|gb...	142.0	[0..12]	[134..1]
gi\|53732954 - gi\|53732954\|ref\|ZP_00155342.2\| COG0818: Diacylglycerol kinase [Haemophilus influenzae R2846]	141.0	[0..15]	[130..2]
gi\|33148567, gi\|... - gi\|33152344\|ref\|NP_873697.1\| diacylglycerol kinase [Haemophilus ducreyi 35000HP], gi\|33148567\|gb\|AAP...	140.0	[0..12]	[130..1]

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Predicted Domain #1

Region A:
Residues: [1-134]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTIAQVDGI IMKPANNHGI KRIFRATGFS MKGLKAAWIH EAAFRQELML AVVMLPVAFL  60
   61 VDISTMERLM LILTLFIVLI VELLNSAIEA VVDRVGSEIH HLSGQAKDIA SAAVFMSLAL 120
  121 CGITWLVVLL PLLV

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	42.79588
Match:	PF01219.10
Description:	No description for PF01219.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits