YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24373582, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	348 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24373582, gi|....

Description	E-value	Query Range	Subject Range
gi\|78505530, gi\|... - gi\|78686770\|ref\|ZP_00851533.1\| Ferrochelatase [Shewanella sp. ANA-3], gi\|78505530\|gb\|EAP19060.1\| Fer...	478.0	[0..1]	[348..1]
gi\|82498549, gi\|... - gi\|82498549\|ref\|ZP_00884038.1\| Ferrochelatase [Shewanella sp. MR-4], gi\|82403456\|gb\|EAP44188.1\| Ferr...	477.0	[0..1]	[348..1]
gi\|78508203, gi\|... - gi\|78692398\|ref\|ZP_00856932.1\| Ferrochelatase [Shewanella sp. MR-7], gi\|78508203\|gb\|EAP21691.1\| Ferr...	476.0	[0..1]	[348..1]
gi\|82743684, gi\|... - gi\|82743684\|ref\|ZP_00906315.1\| Ferrochelatase [Shewanella sp. W3-18-1], gi\|82718951\|gb\|EAP53886.1\| F... gi\|145565082, gi... - gi\|77816807\|ref\|ZP_00815955.1\| Ferrochelatase [Shewanella putrefaciens CN-32], gi\|77808240\|gb\|EAO927...	470.0	[0..1]	[344..1]
HEMH_DECAR - Ferrochelatase OS=Dechloromonas aromatica (strain RCB) GN=hemH PE=3 SV=1	454.0	[0..8]	[347..4]
HEMH_CHRVO - Ferrochelatase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /... HEMZ_CHRVO, HEMH... - (Q7NV65) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme synthetase), Ferrochelatase OS=C...	452.0	[0..8]	[344..6]
gi\|114773224, gi... - gi\|114773224\|ref\|ZP_01450459.1\| Protoheme ferro-lyase [alpha proteobacterium HTCC2255], gi\|114546343... gi\|114773224 - gi\|114773224\|ref\|ZP_01450459.1\| Protoheme ferro-lyase [alpha proteobacterium HTCC2255]	451.0	[0..8]	[344..3]
HEMH_NITEU - Ferrochelatase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=hemH PE=3 SV=1 HEMZ_NITEU, HEMH... - (Q82UK8) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme synthetase), Ferrochelatase OS=N...	451.0	[0..9]	[346..5]
gi\|68547417, gi\|... - gi\|68547417\|ref\|ZP_00586954.1\| Ferrochelatase [Shewanella amazonensis SB2B], gi\|68514935\|gb\|EAN38659...	451.0	[0..23]	[344..3]
HEMH_ALTMD - Ferrochelatase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=hemH PE=3 SV=1	451.0	[0..8]	[347..3]

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Predicted Domain #1

Region A:
Residues: [1-348]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLACRGIWLI KGSTLTSPSP AFGVLLVNLG TPDEPTPKAV KRFLKQFLSD PRVVDLSPWL  60
   61 WQPILQGIIL NTRPKKVAKL YQSVWTEQGS PLMVISQCQA QKLATDLSAT FNQTIPVELG 120
  121 MSYGNPSIES GFAKLKAQGA ERIVVLPLYP QYSCSTVASV FDAVAHYLTR VRDIPELRFN 180
  181 KQYFAHEAYI AALAHSVKRH WKTHGQAEKL ILSFHGIPLR YATEGDPYPE QCRTTAKLLA 240
  241 QALGLTDGQW QVCFQSRFGK EEWLTPYADE LLADLPRQGV KSVDVICPAF ATDCLETLEE 300
  301 ISIGAKETFL HAGGEAYHFI PCLNDDELHI ELLRLLVQEQ TQSWISAE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	110.0
Match:	2po7A
Description:	No description for 2po7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits