YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24347834, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	192 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24347834, gi|....

Description	E-value	Query Range	Subject Range
gi\|146157063, gi... - gi\|90591140\|ref\|ZP_01246784.1\| transferase hexapeptide repeat [Flavobacterium johnsoniae UW101], gi\|...	181.0	[0..2]	[184..3]
gi\|78505860, gi\|... - gi\|78686391\|ref\|ZP_00851159.1\| maltose O-acetyltransferase [Shewanella sp. ANA-3], gi\|78505860\|gb\|EA...	180.0	[0..1]	[182..1]
gi\|113970629, gi... - gi\|82496695\|ref\|ZP_00882260.1\| maltose O-acetyltransferase [Shewanella sp. MR-4], gi\|82405270\|gb\|EAP...	178.0	[0..1]	[182..1]
gi\|20906180, gi\|... - gi\|21227775\|ref\|NP_633697.1\| galactoside-O-acetyltransferase [Methanosarcina mazei Go1], gi\|20906180...	178.0	[0..1]	[187..43]
gi\|160861364, gi... - gi\|160875842\|ref\|YP_001555158.1\| hexapaptide repeat-containing transferase [Shewanella baltica OS195...	178.0	[0..2]	[184..12]
gi\|68007712, gi\|... - gi\|68055734\|ref\|ZP_00539876.1\| transferase hexapeptide repeat [Exiguobacterium sibiricum 255-15], gi...	176.0	[0..1]	[181..1]
gi\|68519346, gi\|... - gi\|68542977\|ref\|ZP_00582696.1\| transferase hexapeptide repeat [Shewanella baltica OS155], gi\|6851934...	176.0	[0..2]	[184..12]
gi\|110622356, gi... - gi\|147919304\|ref\|YP_686960.1\| maltose o-acetyltransferase [uncultured methanogenic archaeon RC-I], g...	176.0	[0..1]	[181..1]
gi\|59480045, gi\|... - gi\|59711944\|ref\|YP_204720.1\| maltose O-acetyltransferase [Vibrio fischeri ES114], gi\|59480045\|gb\|AAW...	176.0	[0..1]	[181..1]
gi\|78508842, gi\|... - gi\|78691759\|ref\|ZP_00856356.1\| Maltose O-acetyltransferase [Shewanella sp. MR-7], gi\|78508842\|gb\|EAP...	175.0	[0..1]	[183..1]

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Predicted Domain #1

Region A:
Residues: [1-192]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKQKMLAG QPYKAWDDAL LAERMRAKSI CHQFNQADPT LLDARMAHLR GLLDIPACAH  60
   61 IEPNFFCDYG YNIHIGKQFY ANHNLTILDV CSVLIGDNVM FGPHVMISTA THPIDPIARQ 120
  121 TIEYGAPIQI GNNVWLGGNV SVLPGVIIGD NCVIGAGSVV NKSIPSNCVA AGNPCKVIKP 180
  181 IDVDYHRNVN AE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.39794
Match:	2ic7A
Description:	No description for 2ic7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits