YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24347606, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	79 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24347606, gi|....

Description	E-value	Query Range	Subject Range
gi\|60680869, gi\|... - gi\|60680869\|ref\|YP_211013.1\| putative transmembrane ferrous transport fusion protein [Bacteroides fr... gi\|52215575, gi\|... - gi\|53712710\|ref\|YP_098702.1\| putative ferrous iron transport protein [Bacteroides fragilis YCH46], g... gi\|251947091, gi... - gi\|253563315\|ref\|ZP_04840772.1\| conserved hypothetical protein [Bacteroides sp. 3_2_5], gi\|251947091...	90.0	[0..1]	[74..1]
FEOB1_PORGI - Ferrous iron transport protein B OS=Porphyromonas gingivalis GN=feoB1 PE=3 SV=1 FEOB1_PORGI - Ferrous iron transport protein B OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=feoB1 PE...	89.0	[0..1]	[77..1]
gi\|45522647, gi\|... - gi\|67926148\|ref\|ZP_00519383.1\| FeoA [Crocosphaera watsonii WH 8501], gi\|67852004\|gb\|EAM47528.1\| FeoA...	88.0	[0..3]	[77..134]
gi\|251837772, gi... - gi\|253572640\|ref\|ZP_04850041.1\| conserved hypothetical protein [Bacteroides sp. 1_1_6], gi\|251837772... gi\|29338900, gi\|... - gi\|29347002\|ref\|NP_810505.1\| putative ferrous iron transport protein [Bacteroides thetaiotaomicron V...	88.0	[0..1]	[74..1]
gi\|60494732, gi\|... - gi\|60683298\|ref\|YP_213442.1\| putative iron transport, fusion membrane protein [Bacteroides fragilis ...	87.0	[0..1]	[74..1]
gi\|29342564, gi\|... - gi\|29375105\|ref\|NP_814258.1\| ferrous iron transport protein A [Enterococcus faecalis V583], gi\|29342... gi\|227177093, gi... - gi\|227553840\|ref\|ZP_03983889.1\| ferrous iron transport protein A [Enterococcus faecalis HH22], gi\|22...	87.0	[0..2]	[76..82]
gi\|69263206, gi\|... - gi\|69263206\|ref\|ZP_00608910.1\| FeoA [Magnetococcus sp. MC-1], gi\|68244491\|gb\|EAN26679.1\| FeoA [Magne...	87.0	[0..1]	[75..21]
gi\|219536621, gi... - gi\|219666361\|ref\|YP_002456796.1\| ferrous iron transport protein B [Desulfitobacterium hafniense DCB-...	87.0	[0..1]	[79..1]
gi\|57233538, gi\|... - gi\|57233538\|ref\|YP_180848.1\| iron dependent repressor, putative [Dehalococcoides ethenogenes 195], g...	86.0	[0..3]	[76..166]
gi\|75812450, gi\|... - gi\|75812450\|ref\|YP_320069.1\| hypothetical protein Ava_B0168 [Anabaena variabilis ATCC 29413], gi\|757...	86.0	[0..3]	[77..36]

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Predicted Domain #1

Region A:
Residues: [1-79]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSELSPGD RGIISEIGRL DLPQTVKRKL LSMGITPNTR FSLIRRAPLG SGLELDIRGS  60
   61 KLCMRRDLAD IIEVEKAND

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	12.154902
Match:	2h3jA
Description:	No description for 2h3jA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits