YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24347449, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	253 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24347449, gi|....

Description	E-value	Query Range	Subject Range
gi\|78691316, gi\|... - gi\|78691316\|ref\|ZP_00855938.1\| 3(2),5 -bisphosphate nucleotidase, bacterial [Shewanella sp. MR-7], g...	236.0	[0..1]	[253..16]
gi\|78504527, gi\|... - gi\|78687749\|ref\|ZP_00852488.1\| 3(2),5 -bisphosphate nucleotidase, bacterial [Shewanella sp. ANA-3], ...	235.0	[0..1]	[253..16]
gi\|113970952, gi... - gi\|82496386\|ref\|ZP_00881954.1\| 3(2),5 -bisphosphate nucleotidase, bacterial [Shewanella sp. MR-4], g...	234.0	[0..1]	[253..16]
gi\|160860144, gi... - gi\|160874622\|ref\|YP_001553938.1\| 3'(2'),5'-bisphosphate nucleotidase [Shewanella baltica OS195], gi\|... gi\|217974036, gi... - gi\|217974036\|ref\|YP_002358787.1\| 3'(2'),5'-bisphosphate nucleotidase [Shewanella baltica OS223], gi\|...	232.0	[0..1]	[253..16]
gi\|69949496, gi\|... - gi\|69949496\|ref\|ZP_00637493.1\| 3(2),5 -bisphosphate nucleotidase, bacterial [Shewanella frigidimarin...	227.0	[0..1]	[251..11]
SUHB_PASMU - Inositol-1-monophosphatase OS=Pasteurella multocida (strain Pm70) GN=suhB PE=3 SV=1 SUHB_PASMU - Inositol-1-monophosphatase OS=Pasteurella multocida GN=suhB PE=3 SV=1	225.0	[0..1]	[253..5]
gi\|56315147, gi\|... - gi\|56479104\|ref\|YP_160693.1\| inositol monophosphatase (extragenic suppressor protein) [Aromatoleum a...	222.0	[0..1]	[245..5]
gi\|153824590, gi... - gi\|153824590\|ref\|ZP_01977257.1\| inositol monophosphate family protein [Vibrio cholerae MZO-2], gi\|14... gi\|15640764, gi\|... - gi\|9655190\|gb\|AAF93910.1\| inositol monophosphate family protein [Vibrio cholerae O1 biovar El Tor st... gi\|147673841, gi... - gi\|227117119\|ref\|YP_002819015.1\| inositol monophosphate family protein [Vibrio cholerae O395], gi\|22... gi\|11278809 - gi\|11278809\|pir\|\|D82285 inositol monophosphate family protein VC0745 [imported] - Vibrio cholerae (s... gi\|254285463, gi... - gi\|254285463\|ref\|ZP_04960427.1\| inositol monophosphate family protein [Vibrio cholerae AM-19226], gi... gi\|150421370, gi... - gi\|254222202\|ref\|ZP_04916075.1\| inositol monophosphate family protein [Vibrio cholerae RC385], gi\|19... gi\|148875114, gi... - gi\|153829394\|ref\|ZP_01982061.1\| inositol monophosphate family protein [Vibrio cholerae 623-39], gi\|1... gi\|121628543, gi... - gi\|121729726\|ref\|ZP_01682167.1\| inositol monophosphate family protein [Vibrio cholerae V52], gi\|1216... gi\|121591446, gi... - gi\|121591446\|ref\|ZP_01678722.1\| inositol monophosphate family protein [Vibrio cholerae 2740-80], gi\|... gi\|153220643, gi... - gi\|153220643\|ref\|ZP_01951754.1\| inositol monophosphate family protein [Vibrio cholerae MAK 757], gi\|... gi\|153216253, gi... - gi\|153216253\|ref\|ZP_01950353.1\| inositol monophosphate family protein [Vibrio cholerae 1587], gi\|124... gi\|254847882, gi... - gi\|254847882\|ref\|ZP_05237232.1\| inositol monophosphate family protein [Vibrio cholerae MO10], gi\|254... gi\|153800620, gi... - gi\|153800620\|ref\|ZP_01955206.1\| inositol monophosphate family protein [Vibrio cholerae MZO-3], gi\|12... gi\|126519760, gi... - gi\|153822729\|ref\|ZP_01975396.1\| inositol monophosphate family protein [Vibrio cholerae B33], gi\|1265... gi\|227080924, gi... - gi\|227080924\|ref\|YP_002809475.1\| inositol monophosphate family protein [Vibrio cholerae M66-2], gi\|2...	220.0	[0..1]	[253..26]
gi\|86607939, gi\|... - gi\|86607939\|ref\|YP_476701.1\| 3'(2'),5'-bisphosphate nucleotidase [Synechococcus sp. JA-2-3B'a(2-13)]... gi\|86607939 - gi\|86607939\|ref\|YP_476701.1\| 3'(2'),5'-bisphosphate nucleotidase [Cyanobacteria bacterium Yellowston...	220.0	[0..1]	[252..10]
gi\|85059750, gi\|... - gi\|85059750\|ref\|YP_455452.1\| inositol monophosphatase [Sodalis glossinidius str. 'morsitans'], gi\|84...	220.0	[0..1]	[247..5]

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Predicted Domain #1

Region A:
Residues: [1-253]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLVNIAHA AGDAIMAIYA QEHIAVTQKS DESPVTAADL AAHRVIVSQL AEQFAGIAVM  60
   61 SEEAADIAWD EREQWQTYWL IDPLDGTKEF IKRNGEFTVN IALIHQGEAI AGVVYAPVLN 120
  121 TTYYGARHLG AWRQDGQQEQ LLQGCKIPRQ VPIVVGSRSH LSPDVADYLN NIGQHEMLSV 180
  181 GSSLKFCMLA EGKADLYPRL GPTSEWDTAA AQAVLESAGG KVVCYDSGLP LTYNQKPDIL 240
  241 NPYFIATAPG WAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.30103
Match:	2qflA
Description:	No description for 2qflA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits