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View Structure Prediction Details

Protein: gi|24346608, gi|...
Organism: Shewanella oneidensis MR-1
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24346608, gi|....

Description E-value Query
Range
Subject
Range
gi|46136511, gi|... - gi|46136511|ref|XP_389947.1| hypothetical protein FG09771.1 [Gibberella zeae PH-1], gi|42553297|gb|E...
298.0 [0..3] [358..167]
gi|111062770 - gi|111062770|gb|EAT83890.1| hypothetical protein SNOG_08722 [Phaeosphaeria nodorum SN15]
250.0 [0..2] [364..175]
CAX2_ARATH - Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2
250.0 [0..3] [364..63]
gi|49108966, gi|... - gi|67901046|ref|XP_680779.1| hypothetical protein AN7510.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
246.0 [0..5] [364..155]
gi|40782189 - gi|40782189|emb|CAE30484.1| low affinity calcium transporter CAX2 [Arabidopsis halleri subsp. haller...
238.0 [0..3] [364..21]
gi|83766993 - gi|83766993|dbj|BAE57133.1| unnamed protein product [Aspergillus oryzae]
gi|169769330 - gi|169769330|ref|XP_001819135.1| hypothetical protein [Aspergillus oryzae RIB40]
238.0 [0..3] [362..160]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFIKDEFA LLLGILTLVF FKTGGDSLLA DGTALSTYIP VSLALLGVVT WAIFSVVRHS  60
   61 DALAIKLGDP YGTLILTLSV ISLEVVMISS VMLTGEPNPV MARDTMFAVV MIITNGLVGF 120
  121 TLLLGGWRYH TQHFNLDGVK SYLVAIIPLA LLCLVLPNFT EGGTVGGMSK PMSWMLIIIS 180
  181 ILLYGIFLVV QTKSHSHFF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDADNEDHEE HHGILRSNIY HTLLLIGYLL VVILLAKTLA MPINYSVASL GAPPALGGFV  60
   61 VACLILSPEA VGGFKAALNN QLQRAMNLYF GSVLATIALT VPAVLIVGSV INQEVHLGLS 120
  121 AADMVLLATT LMVCKVSFSS GRTNALHGAT HLVLFIVYLF LMFEHA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 10.69897
Match: PF01699.15
Description: No description for PF01699.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle