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View Structure Prediction Details

Protein: gi|24372419, gi|...
Organism: Shewanella oneidensis MR-1
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24372419, gi|....

Description E-value Query
Range
Subject
Range
gi|91938, gi|710... - pir||A28114 alkaline phosphatase (EC 3.1.3.1) precursor - rat, gi|7106246|ref|NP_037191.1| tissue-n...
464.0 [0..17] [446..23]
gi|108998962 - gi|108998962|ref|XP_001109717.1| PREDICTED: tissue non-specific alkaline phosphatase [Macaca mulatta...
463.0 [0..5] [447..130]
PPBT_FELCA - Alkaline phosphatase, tissue-nonspecific isozyme OS=Felis catus GN=ALPL PE=1 SV=1
462.0 [0..5] [452..2]
gi|11692623 - gi|11692623|gb|AAG39908.1| tissue-nonspecific alkaline phosphatase [Mus musculus]
461.0 [0..5] [446..2]
gi|62089214 - gi|62089214|dbj|BAD93051.1| ALPL protein variant [Homo sapiens]
460.0 [0..5] [447..80]

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Predicted Domain #1
Region A:
Residues: [1-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSITKAPLLL LGMSLWLSSP TFAAEAGANE TDPVKAPSRP KNIVIMIGDG MGPSYTSAYR  60
   61 YYKDNRDTEE VEQTVFDRLL VGMASTYPAS VSGYVTDSAA AATALATGVK SYNGAISVDT 120
  121 QKQPLPTILE KAKSLGLSTG VAVTSQINHA TPAAFLSHNE SRKNYDALAL SYLQTNADVF 180
  181 LGGGQKYFSP ELLAQFTSKG YQHITRFEEL ASISQPKVIG LFAEVQLPWA IDEKDAKKLS 240
  241 TLTQKALNLL SQNEQGFVLL VEGSLIDWAG HNNDIAAAMG EMDEFANAIE VVEQFVRQNS 300
  301 DTLMVITADH STGGLSIGAD GNYNWNPEIL RNISASADTL AQAAISGDAW QADLSRGLGF 360
  361 ALTEEETSKL SAARTQGAET LAVAIRYVID KRTDTGWTTG GHTGMDVQVF AAGPASELFN 420
  421 GHQDNTDIAN KIFSLLPKPK KPKTPAPTTV QPQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 1zebA
Description: X-ray structure of alkaline phosphatase from human placenta in complex with 5'-AMP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on ester bonds 2.8318172470006 bayes_pls_golite062009
catalytic activity 2.31328968099128 bayes_pls_golite062009
phosphatase activity 1.51067400873904 bayes_pls_golite062009
phosphoric ester hydrolase activity 1.32325931665891 bayes_pls_golite062009
hydrolase activity 0.699329749377626 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.515209766971615 bayes_pls_golite062009
kinase activity 0.503509300116176 bayes_pls_golite062009
binding 0.372100920520647 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.356909797780746 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle