YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24346116, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	191 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24346116, gi|....

Description	E-value	Query Range	Subject Range
gi\|90580849, gi\|... - gi\|90580849\|ref\|ZP_01236651.1\| para-aminobenzoate synthase component II [Vibrio angustum S14], gi\|90...	211.0	[0..1]	[188..1]
gi\|2983181, gi\|1... - gi\|2983181\|gb\|AAC06781.1\| anthranilate synthase component II [Aquifex aeolicus VF5], gi\|15606008\|ref... gi\|7436747 - pir\|\|E70349 anthranilate synthase component II - Aquifex aeolicus	210.0	[0..2]	[190..3]
gi\|89049039, gi\|... - gi\|89075217\|ref\|ZP_01161648.1\| para-aminobenzoate synthase component II [Photobacterium sp. SKA34], ...	209.0	[0..1]	[188..1]
gi\|255662132, gi... - gi\|83720076\|ref\|YP_443417.1\| anthranilate synthase component II [Burkholderia thailandensis E264], g... gi\|167582462 - gi\|167582462\|ref\|ZP_02375336.1\| anthranilate synthase component II [Burkholderia thailandensis TXDOH...	208.0	[0..1]	[190..1]
gi\|48845510, gi\|... - gi\|78223697\|ref\|YP_385444.1\| anthranilate synthase component II [Geobacter metallireducens GS-15], g...	208.0	[0..1]	[189..1]
gi\|39997477, gi\|... - gi\|39997477\|ref\|NP_953428.1\| anthranilate synthase component II [Geobacter sulfurreducens PCA], gi\|3...	207.0	[0..1]	[189..1]
gi\|53720660, gi\|... - gi\|53720660\|ref\|YP_109646.1\| anthranilate synthase component II [Burkholderia pseudomallei K96243], ... gi\|52423503, gi\|... - gi\|53717533\|ref\|YP_105300.1\| anthranilate synthase component II [Burkholderia mallei ATCC 23344], gi... gi\|100059030, gi... - gi\|67753036\|ref\|ZP_00491986.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|100120595, gi... - gi\|67758516\|ref\|ZP_00497279.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|134245350, gi... - gi\|134283155\|ref\|ZP_01769856.1\| anthranilate synthase component II [Burkholderia pseudomallei 305], ... gi\|67647446, gi\|... - gi\|67647446\|ref\|ZP_00445688.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|121224943, gi... - gi\|84520602\|ref\|ZP_01007739.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|76810520, gi\|... - gi\|76810520\|ref\|YP_334941.1\| anthranilate synthase component II [Burkholderia pseudomallei 1710b], g... gi\|85063547 - gi\|85063547\|ref\|ZP_01024401.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|237813947, gi... - gi\|237813947\|ref\|YP_002898398.1\| para-aminobenzoate/anthranilate synthase glutamine amidotransferase... gi\|100263674, gi... - gi\|87314580\|ref\|ZP_01095622.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|225934971, gi... - gi\|226193001\|ref\|ZP_03788612.1\| anthranilate synthase component II [Burkholderia pseudomallei Pakist... gi\|147751290, gi... - gi\|83622933\|ref\|ZP_00933222.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167721371 - gi\|167721371\|ref\|ZP_02404607.1\| anthranilate synthase component II [Burkholderia pseudomallei DM98] gi\|83676708, gi\|... - gi\|83676708\|ref\|ZP_00938481.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167740340 - gi\|167740340\|ref\|ZP_02413114.1\| anthranilate synthase component II [Burkholderia pseudomallei 14] gi\|161358421, gi... - gi\|82534806\|ref\|ZP_00893833.1\| hypothetical protein Bpse110_02003882 [Burkholderia pseudomallei 1106... gi\|194522302, gi... - gi\|83618251\|ref\|ZP_00928718.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167003485, gi... - gi\|243060999\|gb\|EES43185.1\| anthranilate synthase component II [Burkholderia mallei PRL-20], gi\|1670... gi\|184211058, gi... - gi\|99908085\|ref\|ZP_01315859.1\| hypothetical protein Bpse1_03004801 [Burkholderia pseudomallei 1655],... gi\|167847444 - gi\|167847444\|ref\|ZP_02472952.1\| anthranilate synthase component II [Burkholderia pseudomallei B7210] gi\|67680877, gi\|... - gi\|90290489\|ref\|ZP_01210145.1\| hypothetical protein Bpse17_02004810 [Burkholderia pseudomallei 1710a... gi\|167896032 - gi\|167896032\|ref\|ZP_02483434.1\| anthranilate synthase component II [Burkholderia pseudomallei 7894] gi\|100914236, gi... - gi\|67634652\|ref\|ZP_00433621.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167817557 - gi\|167817557\|ref\|ZP_02449237.1\| anthranilate synthase component II [Burkholderia pseudomallei 91] gi\|238520942, gi... - gi\|67640250\|ref\|ZP_00439064.1\| anthranilate synthase component II [Burkholderia mallei GB8 horse 4],... gi\|167825959 - gi\|167825959\|ref\|ZP_02457430.1\| anthranilate synthase component II [Burkholderia pseudomallei 9] gi\|126452687, gi... - gi\|82529903\|ref\|ZP_00889142.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|124290705, gi... - gi\|124382685\|ref\|YP_001024750.1\| anthranilate synthase component II [Burkholderia mallei NCTC 10229]... gi\|167920646 - gi\|167920646\|ref\|ZP_02507737.1\| anthranilate synthase component II [Burkholderia pseudomallei BCC215... gi\|160696836, gi... - gi\|254175793\|ref\|ZP_04882452.1\| anthranilate synthase component II [Burkholderia mallei ATCC 10399],... gi\|167904418 - gi\|167904418\|ref\|ZP_02491623.1\| anthranilate synthase component II [Burkholderia pseudomallei NCTC 1... gi\|167912680 - gi\|167912680\|ref\|ZP_02499771.1\| anthranilate synthase component II [Burkholderia pseudomallei 112] gi\|217392273, gi... - gi\|217424817\|ref\|ZP_03456314.1\| anthranilate synthase component II [Burkholderia pseudomallei 576], ...	207.0	[0..1]	[190..1]
gi\|56477813, gi\|... - gi\|56477813\|ref\|YP_159402.1\| anthranilate synthase (component II) [Aromatoleum aromaticum EbN1], gi\|...	207.0	[0..1]	[188..1]
gi\|50122986, gi\|... - gi\|50122986\|ref\|YP_052153.1\| para-aminobenzoate synthase component II [Pectobacterium atrosepticum S...	207.0	[0..1]	[189..1]
gi\|86165170, gi\|... - gi\|87119694\|ref\|ZP_01075591.1\| glutamine amidotransferase of anthranilate synthase orpara-aminobenzo...	207.0	[0..1]	[188..1]

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Predicted Domain #1

Region A:
Residues: [1-191]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLMIDNYDS FTFNLVQYFQ QLGQEIVVKR NDEISLEGIE ALAPSHLVIS PGPCSPNEAG  60
   61 ISLAAIEHFA TRLPILGVCL GHQAMAQVFG AKVVRAQRVM HGKVSAIAHT GERLFKGLNQ 120
  121 PLTVTRYHSL LVDTVPKDFV LDAWFDDPTH GREIMAMSHK ELPLFGVQFH PESILTEQGH 180
  181 ELLANFLSQS T

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	42.045757
Match:	1qdlB
Description:	Anthranilate synthase GAT subunit, TrpG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
4-amino-4-deoxychorismate synthase activity	4.48164623771604	bayes_pls_golite062009
anthranilate synthase activity	2.51214170411838	bayes_pls_golite062009
ligase activity	1.77692713123297	bayes_pls_golite062009
oxo-acid-lyase activity	1.35896725827905	bayes_pls_golite062009
catalytic activity	1.30391542469987	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	0.628648036096965	bayes_pls_golite062009
imidazoleglycerol-phosphate synthase activity	0.270391651600004	bayes_pls_golite062009
carbon-carbon lyase activity	0.0769356405014503	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: