YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24372160, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	247 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24372160, gi|....

Description	E-value	Query Range	Subject Range
gi\|27362190, gi\|... - gi\|27365990\|ref\|NP_761518.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio vulnificus CMCP6...	213.0	[0..1]	[241..1]
gi\|91225573, gi\|... - gi\|91225573\|ref\|ZP_01260647.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio alginolyticus ... gi\|254229288, gi... - gi\|75856340\|ref\|ZP_00763970.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio sp. E...	209.0	[0..1]	[239..1]
gi\|52424565, gi\|... - gi\|52424565\|ref\|YP_087702.1\| PlsC protein [Mannheimia succiniciproducens MBEL55E], gi\|52306617\|gb\|AA...	209.0	[0..1]	[236..1]
gi\|116219659, gi... - gi\|75819123\|ref\|ZP_00749220.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole...	208.0	[0..1]	[239..1]
gi\|59479110, gi\|... - gi\|59711009\|ref\|YP_203785.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio fischeri ES114],...	208.0	[0..1]	[238..12]
gi\|12720314, gi\|... - gi\|15601968\|ref\|NP_245040.1\| hypothetical protein PM0103 [Pasteurella multocida subsp. multocida str...	207.0	[0..1]	[239..1]
gi\|169749448, gi... - gi\|170022914\|ref\|YP_001719419.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pseudotube... gi\|167469329 - gi\|167469329\|ref\|ZP_02334033.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis FV-1... gi\|166962801, gi... - gi\|167418807\|ref\|ZP_02310560.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|167398515, gi... - gi\|167398515\|ref\|ZP_02304039.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|186699856, gi... - gi\|186896830\|ref\|YP_001873942.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pseudotube... gi\|162421401, gi... - gi\|162421401\|ref\|YP_001604892.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis Ang... gi\|166211993, gi... - gi\|166211993\|ref\|ZP_02238028.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|229705478, gi... - gi\|229837355\|ref\|ZP_04457518.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis Pest... gi\|229682232, gi... - gi\|229900893\|ref\|ZP_04516017.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis Nepa... gi\|166008748, gi... - gi\|166008748\|ref\|ZP_02229646.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|108809110, gi... - gi\|108809110\|ref\|YP_653026.1\| putative acyltransferase [Yersinia pestis Antiqua], gi\|108781023\|gb\|AB... gi\|165939859, gi... - gi\|165939859\|ref\|ZP_02228398.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|229690152, gi... - gi\|229842885\|ref\|ZP_04463037.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|165923174, gi... - gi\|165924974\|ref\|ZP_02220806.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|229696932, gi... - gi\|229840566\|ref\|ZP_04460725.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|25346998 - pir\|\|AC0083 1-acylglycerol-3-phosphate O-acyltransferase (EC 2.3.1.51) [imported] - Yersinia pestis ... gi\|51597689, gi\|... - gi\|51597689\|ref\|YP_071880.1\| putative acyltransferase (LPAAT) [Yersinia pseudotuberculosis IP 32953]... gi\|45437617, gi\|... - gi\|45442751\|ref\|NP_994290.1\| putative acyltransferase [Yersinia pestis biovar Microtus str. 91001], ... Q665W9\|Q665W9_YERPS - Putative acyltransferase (LPAAT) precursor - Yersinia pseudotuberculosis gi\|16120997, gi\|... - gi\|218927865\|ref\|YP_002345740.1\| putative acyltransferase [Yersinia pestis CO92], gi\|16120997\|ref\|NP... gi\|153947585, gi... - gi\|153947585\|ref\|YP_001399575.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pseudotube... gi\|149289704, gi... - gi\|150260296\|ref\|ZP_01917024.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis CA88... gi\|145597765, gi... - gi\|145597765\|ref\|YP_001161841.1\| acyltransferase [Yersinia pestis Pestoides F], gi\|145209461\|gb\|ABP3...	207.0	[0..1]	[236..1]
gi\|167425098, gi... - gi\|167425098\|ref\|ZP_02316851.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis biov... gi\|21960466, gi\|... - gi\|22127380\|ref\|NP_670803.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia pestis KIM], g...	206.0	[0..1]	[236..1]
gi\|75827771 - gi\|75827771\|ref\|ZP_00757206.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|229354934, gi... - gi\|229507429\|ref\|ZP_04396934.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae BX 3... gi\|116189455, gi... - gi\|75830552\|ref\|ZP_00759828.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|75815119 - gi\|75815119\|ref\|ZP_00745644.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|75824174, gi\|... - gi\|75824174\|ref\|ZP_00753637.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio chole... gi\|229338077, gi... - gi\|229524496\|ref\|ZP_04413901.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae bv. ... gi\|229516771, gi... - gi\|229516771\|ref\|ZP_04406217.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae RC9]... gi\|229513439, gi... - gi\|229513439\|ref\|ZP_04402903.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae TMA ... gi\|229353120, gi... - gi\|229509646\|ref\|ZP_04399127.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae B33]... gi\|229369591, gi... - gi\|229606936\|ref\|YP_002877584.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae MJ-... gi\|229335184, gi... - gi\|229527552\|ref\|ZP_04416944.1\| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Vibrio cholerae 1212... tr\|A0A085QC14\|A0... - 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Vibrio cholerae GN=DN30_1636 PE=3 SV=1	206.0	[0..1]	[239..1]
gi\|77959539, gi\|... - gi\|77959539\|ref\|ZP_00823558.1\| COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Yersinia ber...	206.0	[0..1]	[244..1]

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Predicted Domain #1

Region A:
Residues: [1-247]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLIVRSVLL AVSLLLAFIF GGLVCLLRPR HRDNVHMFAK IFSSAAPILG LKVIVRRPKE  60
   61 VQDGPYIFLG NHQNNFDLFT HTKAVPKGTV SLGKKSLVWI PLFGQIYWLS GNILIDRKNR 120
  121 NSAFDTMAKT AEKIKQNRLS VWIFPEGTRS RGRGLLPFKA GAFHTAIAAG VPVVPVLTSC 180
  181 QSHINLNRWD NGVVIIEMMA PIPTEGLDKA DAKAFSAQVH EIMSAKFNEI NREAATLMGK 240
  241 TIPADDV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	5.69897
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits