YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24346017, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	171 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24346017, gi|....

Description	E-value	Query Range	Subject Range
gi\|68555029, gi\|... - gi\|94309276\|ref\|YP_582486.1\| protein tyrosine phosphatase [Ralstonia metallidurans CH34], gi\|9335312...	161.0	[0..9]	[166..2]
gi\|69279279, gi\|... - gi\|69279279\|ref\|ZP_00614193.1\| Low molecular weight phosphotyrosine protein phosphatase [Mesorhizobi...	159.0	[0..10]	[168..3]
gi\|56378966, gi\|... - gi\|56419124\|ref\|YP_146442.1\| arsenate reductase [Geobacillus kaustophilus HTA426], gi\|56378966\|dbj\|B...	157.0	[0..9]	[146..1]
gi\|83951807, gi\|... - gi\|83951807\|ref\|ZP_00960539.1\| arsenate reductase [Roseovarius nubinhibens ISM], gi\|83836813\|gb\|EAP7...	154.0	[0..11]	[165..4]
gi\|163863046, gi... - gi\|89205829\|ref\|ZP_01184395.1\| Low molecular weight phosphotyrosine protein phosphatase [Bacillus we...	154.0	[0..1]	[146..7]
ARSC_BACHD - Protein ArsC OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)... ARSC_BACHD - Protein ArsC OS=Bacillus halodurans GN=arsC PE=3 SV=1	153.0	[0..11]	[146..2]
gi\|226720063, gi... - gi\|67154624\|ref\|ZP_00416369.1\| Low molecular weight phosphotyrosine protein phosphatase [Azotobacter... gi\|67154624, gi\|... - gi\|67154624\|ref\|ZP_00416369.1\| Low molecular weight phosphotyrosine protein phosphatase [Azotobacter...	153.0	[0..9]	[166..2]
gi\|150031720, gi... - gi\|150377173\|ref\|YP_001313768.1\| protein tyrosine phosphatase [Sinorhizobium medicae WSM419], gi\|150...	153.0	[0..9]	[167..2]
gi\|34103750, gi\|... - gi\|34497894\|ref\|NP_902109.1\| arsenate reductase [Chromobacterium violaceum ATCC 12472], gi\|34103750\|...	152.0	[0..9]	[167..1]
gi\|46201564 - gi\|46201564\|ref\|ZP_00054782.2\| COG0394: Protein-tyrosine-phosphatase [Magnetospirillum magnetotactic...	152.0	[0..10]	[164..3]

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Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKEAIDLT PHFKVLFLCT HNACRSILAE AIARQLAFGL PLTFMSAGSA PSGKVHPMTL  60
   61 KQLQQQGYST TGLNSKSWDA LADFSPDLVI TVCDNAAGET CPLWLGNTQK LHWGLPDPSL 120
  121 QVAERQDVAF LKIIRLLEER VSALLRVDLK AEPRVLSAAL QQIVLAHPLV D

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.0
Match:	1jl3A
Description:	Arsenate reductase ArsC
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits