YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24371738, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	417 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24371738, gi|....

Description	E-value	Query Range	Subject Range
gi\|113968477, gi... - gi\|82495858\|ref\|ZP_00881431.1\| Molybdopterin binding domain [Shewanella sp. MR-4], gi\|82406163\|gb\|EA... gi\|113887081, gi... - gi\|78689120\|ref\|ZP_00853785.1\| Molybdopterin binding domain [Shewanella sp. MR-7], gi\|78511520\|gb\|EA...	466.0	[0..1]	[417..28]
gi\|68058219, gi\|... - gi\|68250020\|ref\|YP_249132.1\| molybdopterin biosynthesis protein MoeA [Haemophilus influenzae 86-028N... gi\|148825991, gi... - gi\|148825991\|ref\|YP_001290744.1\| GTP cyclohydrolase I [Haemophilus influenzae PittEE], gi\|148716151\|... gi\|229810183, gi... - gi\|229846694\|ref\|ZP_04466801.1\| GTP cyclohydrolase I [Haemophilus influenzae 7P49H1], gi\|229810183\|g...	465.0	[0..13]	[416..1]
gi\|42629477 - gi\|42629477\|ref\|ZP_00155023.1\| COG0303: Molybdopterin biosynthesis enzyme [Haemophilus influenzae R2...	465.0	[0..13]	[416..1]
MOEA_HAEIN - Molybdopterin molybdenumtransferase OS=Haemophilus influenzae GN=moeA PE=3 SV=1 MOEA_HAEIN - Molybdopterin molybdenumtransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 ...	464.0	[0..13]	[416..1]
gi\|117610921, gi... - gi\|78685457\|ref\|ZP_00850235.1\| Molybdopterin binding domain [Shewanella sp. ANA-3], gi\|78506835\|gb\|E...	463.0	[0..1]	[417..28]
gi\|82740241, gi\|... - gi\|82740241\|ref\|ZP_00902983.1\| Molybdopterin binding domain [Shewanella sp. W3-18-1], gi\|82722355\|gb... gi\|146291242, gi... - gi\|77814332\|ref\|ZP_00813592.1\| Molybdenum cofactor biosynthesis protein [Shewanella putrefaciens CN-...	463.0	[0..1]	[417..1]
gi\|68541320, gi\|... - gi\|68541320\|ref\|ZP_00581065.1\| Molybdenum cofactor biosynthesis protein [Shewanella baltica OS155], ...	461.0	[0..1]	[417..1]
gi\|119765780, gi... - gi\|68545391\|ref\|ZP_00584942.1\| Molybdenum cofactor biosynthesis protein [Shewanella amazonensis SB2B...	460.0	[0..1]	[416..1]
gi\|160873262, gi... - gi\|160873262\|ref\|YP_001552578.1\| molybdenum cofactor synthesis domain-containing protein [Shewanella...	460.0	[0..1]	[417..1]
gi\|15602559, gi\|... - gi\|15602559\|ref\|NP_245631.1\| hypothetical protein PM0694 [Pasteurella multocida subsp. multocida str...	458.0	[0..13]	[416..1]

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Predicted Domain #1

Region A:
Residues: [1-417]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKADPCSQ PSLMHPDQAI PLMLEQVSPV SDTEVVSLPH ALGRVLAEDL ASCIDLPPFD  60
   61 NSSMDGYAFR FADLTSEAKQ TTLTLIGSSF AGHGFEGRIT PNSCVRIMTG APVPAGYDTV 120
  121 QMQEETQANG DQIQINHPKA KGVNVRCQGE ELLQGTKVLK AGIEINAAEL GVLATIGVSQ 180
  181 VRVYRQLKVA FFSTGDELRP VGSDLAPGQI YDSNRYSIQG LLSRANVEWL DLGVVSDDPE 240
  241 AIRHAFRHAA SQADMVLTSG GVSVGEADFT KQILDEEGKI TFWKLAIKPG KPFAMGRIGK 300
  301 AIFCGLPGNP VSSMVTFYKL VWPILNKMQG LTPKAPLMLS ATLTTPVRKQ PGRVEYQRGI 360
  361 LSRNAQGELE VAITGSQGSG MLTSMSLANC FVQLEQFQGD TPAGSQVTVE PFNSVLC

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	123.0
Match:	1fc5A
Description:	Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain; Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains; MoeA, central domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.55991563183069	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: