YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24345351, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	146 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24345351, gi|....

Description	E-value	Query Range	Subject Range
gi\|116283284 - gi\|116283284\|gb\|AAH03240.1\| Por protein [Mus musculus]	150.0	[0..1]	[146..73]
gi\|84579083 - gi\|84579083\|dbj\|BAE72975.1\| hypothetical protein [Macaca fascicularis]	150.0	[0..1]	[146..1]
gi\|109066226 - gi\|109066226\|ref\|XP_001109615.1\| PREDICTED: cytochrome P450 reductase isoform 1 [Macaca mulatta]	150.0	[0..1]	[146..1]
gi\|62089334 - gi\|62089334\|dbj\|BAD93111.1\| Hypothetical protein DKFZp686G04235 variant [Homo sapiens]	149.0	[0..1]	[146..82]
NCPR_CAVPO - NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=Por PE=2 SV=2	148.0	[0..1]	[146..73]

Back

Predicted Domain #1

Region A:
Residues: [1-146]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKIAILVGT TLGSSEYIAD EMQAQLTPLG HEVHTFLHPT LDELKPYPLW ILVSSTHGAG  60
   61 DLPDNLQPFC KELLLNTPDL TQVKFALCAI GDSSYDTFCQ GPEKLIEALE YSGAKAVVDK 120
  121 IQIDVQQDPV PEDPALAWLA QWQDQI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.522879
Match:	2hnaA
Description:	No description for 2hnaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits