YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24113132, gi\|...
Organism:	Shigella flexneri 2a str. 301
Length:	197 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24113132, gi|....

Description	E-value	Query Range	Subject Range
gi\|194468520, gi... - gi\|194468520\|ref\|ZP_03074504.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... lcl\|NC_016856.1_... - [gene=tehB] [protein=tellurite resistance protein TehB] [protein_id=YP_005237513.1] [location=comple... gi\|198246192, gi... - gi\|198246192\|ref\|YP_002215539.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enter... gi\|238911844 - gi\|238911844\|ref\|ZP_04655681.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|16420133, gi\|... - gi\|16764952\|ref\|NP_460567.1\| tellurite resistance protein TehB [Salmonella typhimurium LT2], gi\|1642... gi\|168230023, gi... - gi\|205335472\|gb\|EDZ22236.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica s... gi\|205351061, gi... - gi\|205351061\|gb\|EDZ37692.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica s... gi\|205329018, gi... - gi\|205329018\|gb\|EDZ15782.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica s...	152.0	[0..1]	[196..1]
gi\|197362372, gi... - gi\|197362372\|ref\|YP_002142009.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enter... gi\|56413449, gi\|... - gi\|56413449\|ref\|YP_150524.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica ... gi\|197265992, gi... - gi\|197265992\|ref\|ZP_03166066.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|62180175, gi\|... - gi\|62180175\|ref\|YP_216592.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica ... gi\|194409209, gi... - gi\|194450905\|ref\|YP_002045647.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enter... gi\|194443061, gi... - gi\|194443061\|ref\|YP_002040854.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enter... gi\|195633907, gi... - gi\|195633907\|gb\|EDX52259.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica s... gi\|168241157, gi... - gi\|205339695\|gb\|EDZ26459.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica s... gi\|205325006, gi... - gi\|205325006\|gb\|EDZ12845.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica s... gi\|161613935, gi... - gi\|161613935\|ref\|YP_001587900.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enter...	152.0	[0..1]	[196..1]
gi\|213052210 - gi\|213052210\|ref\|ZP_03345088.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|213416597 - gi\|213416597\|ref\|ZP_03349741.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|29137590, gi\|... - gi\|29141961\|ref\|NP_805303.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica ... gi\|213426254 - gi\|213426254\|ref\|ZP_03359004.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|16760272 - gi\|16760272\|ref\|NP_455889.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enterica ... gi\|213646905 - gi\|213646905\|ref\|ZP_03376958.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|213857686 - gi\|213857686\|ref\|ZP_03384657.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|25512265, gi\|... - gi\|25512265\|pir\|\|AD0668 tellurite resistance protein TehB [imported] - Salmonella enterica subsp. en... gi\|213973748 - gi\|213973748\|ref\|ZP_03401007.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri... gi\|214000789 - gi\|214000789\|ref\|ZP_03411524.1\| tellurite resistance protein TehB [Salmonella enterica subsp. enteri...	152.0	[0..1]	[196..1]
gi\|110343204, gi... - gi\|110641612\|ref\|YP_669342.1\| tellurite resistance protein TehB [Escherichia coli 536], gi\|110343204... gi\|191170990, gi... - gi\|75242173\|ref\|ZP_00725967.1\| COG0500: SAM-dependent methyltransferases [Escherichia coli F11], gi\|...	151.0	[0..1]	[197..1]
gi\|13361501, gi\|... - gi\|15831289\|ref\|NP_310062.1\| TehB [Escherichia coli O157:H7], gi\|13361501\|dbj\|BAB35458.1\| tellurite ... gi\|254792975, gi... - gi\|254792975\|ref\|YP_003077812.1\| predicted S-adenosyl-L-methionine-dependent methyltransferase [Esch... gi\|209771050, gi... - pir\|\|D85735 tellurite resistance [imported] - Escherichia coli (strain O157:H7, substrain EDL933), ... gi\|12515275, gi\|... - gi\|15801712\|ref\|NP_287730.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 EDL933], gi... gi\|168748970, gi... - gi\|188016597\|gb\|EDU54719.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4113]... gi\|217329354, gi... - gi\|217329354\|ref\|ZP_03445434.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. TW1... gi\|209157814, gi... - gi\|209396414\|ref\|YP_002270438.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC... gi\|208738378, gi... - gi\|208818255\|ref\|ZP_03258575.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4... gi\|208815440, gi... - gi\|208815440\|ref\|ZP_03256619.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4... gi\|188999669, gi... - gi\|188999669\|gb\|EDU68655.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4076]... gi\|187767530, gi... - gi\|187767530\|gb\|EDU31374.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4196]... gi\|189359435, gi... - gi\|189359435\|gb\|EDU77854.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4486]... gi\|189366651, gi... - gi\|189366651\|gb\|EDU85067.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4501]... gi\|208811037, gi... - gi\|208811037\|ref\|ZP_03252870.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4... gi\|13361501, gi\|... - gi\|15831289\|ref\|NP_310062.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. Sakai]... gi\|195938052 - gi\|195938052\|ref\|ZP_03083434.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC4... gi\|189378001, gi... - gi\|189378001\|gb\|EDU96417.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC508],... gi\|189371882, gi... - gi\|189371882\|gb\|EDU90298.1\| tellurite resistance protein TehB [Escherichia coli O157:H7 str. EC869],...	150.0	[0..1]	[197..1]
gi\|227886183, gi... - gi\|227886183\|ref\|ZP_04003988.1\| tellurite resistance protein TehB [Escherichia coli 83972], gi\|22783... gi\|226900166, gi... - gi\|237705409\|ref\|ZP_04535890.1\| tellurite resistance protein tehB [Escherichia sp. 3_2_53FAA], gi\|22... gi\|117623677, gi... - gi\|117623677\|ref\|YP_852590.1\| tellurite resistance protein TehB [Escherichia coli APEC O1], gi\|11551... gi\|170680992, gi... - gi\|170680992\|ref\|YP_001743799.1\| tellurite resistance protein TehB [Escherichia coli SMS-3-5], gi\|17... gi\|218553954, gi... - gi\|218553954\|ref\|YP_002386867.1\| tellurite resistance protein TehB [Escherichia coli IAI1], gi\|21836... gi\|209918702, gi... - gi\|209918702\|ref\|YP_002292786.1\| tellurite resistance protein TehB [Escherichia coli SE11], gi\|20991... gi\|218558363, gi... - gi\|218558363\|ref\|YP_002391276.1\| tellurite resistance protein TehB [Escherichia coli S88], gi\|218365... gi\|191165159, gi... - gi\|75231811\|ref\|ZP_00718152.1\| COG0500: SAM-dependent methyltransferases [Escherichia coli B7A], gi\|... gi\|26247715, gi\|... - gi\|26247715\|ref\|NP_753755.1\| tellurite resistance protein TehB [Escherichia coli CFT073], gi\|2610811...	150.0	[0..1]	[197..1]
gi\|157080923, gi... - gi\|75190478\|ref\|ZP_00703745.1\| COG0500: SAM-dependent methyltransferases [Escherichia coli E24377A],...	150.0	[0..1]	[197..1]
gi\|91072247, gi\|... - gi\|91210673\|ref\|YP_540659.1\| tellurite resistance protein TehB [Escherichia coli UTI89], gi\|91072247...	150.0	[0..1]	[197..1]
gi\|30041150, gi\|... - gi\|30062901\|ref\|NP_837072.1\| tellurite resistance protein TehB [Shigella flexneri 2a str. 2457T], gi...	150.0	[0..1]	[197..1]
gi\|81241154, gi\|... - gi\|82777006\|ref\|YP_403355.1\| tellurite resistance protein TehB [Shigella dysenteriae Sd197], gi\|8124...	150.0	[0..1]	[197..1]

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Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIRDENYFT DKYELTRTHS EVLEAVKVVK PGKTLDLGCG NGRNSLYLAA NGYDVDAWDK  60
   61 NAMSIANVER IKSIENLDNL HTRVVDLNNL TFDGQYDFIL STVVLMFLEA KTIPGLIANM 120
  121 QRCTKPGGYN LIVAAMDTAD YPCTVGFTFA FKEGELRRYY EGWERVKYNE DVGELHRTDA 180
  181 NGNRIKLRFA TMLARKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.30103
Match:	2i6gA
Description:	No description for 2i6gA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.857347609112816	bayes_pls_golite062009
transferase activity	0.769739415230943	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	0.648175251543522	bayes_pls_golite062009
methyltransferase activity	0.646052703874729	bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity	0.512017800238379	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: