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View Structure Prediction Details

Protein: YTP1_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 459 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YTP1_YEAST.

Description E-value Query
Range
Subject
Range
gi|207341886 - gi|207341886|gb|EDZ69822.1| YNL237Wp-like protein [Saccharomyces cerevisiae AWRI1631]
YTP1_YEAST - Protein YTP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YTP1 PE=1 SV=1
YTP1 - Probable type-III integral membrane protein of unknown function, has regions of similarity to mitoch...
0.0 [1..459] [1..459]
YBH6_SCHPO - Uncharacterized membrane protein C3B8.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=S...
SPBC3B8.06 - conserved fungal protein
6.0E-92 [162..400] [206..490]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAANKNIVF GFSRSISAIL LICFFFEKVC GDMEHDMGMD DTSGYTRPEI VQAGSKSFHW  60
   61 LCTLGFLLLL PSVVTCLSFA GRIYSATLLQ CTCAVYAFLE AAVLRFQDND GVENRTSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTAWFLVGLT WITLFFGGLA GGTGFLVKSK RLQTFISNAG EKRLSYIHRG LSFLTVLTGW  60
   61 VKVCLAPVAL FGFCREAHTG QCIAHGIMGS AFVLYGFIYV LVLVIPWIRS AQTSYSQDYV 120
  121 DSWVMCIWGV VNTFTEHRWG REGWSVHDYQ HTFMGIIWWT GGILGIFLSR NGRRTFVPSL 180
  181 IIIFTGWAMS EHAQHLIIST KVHNMFGLVL MCGGALRIIE ISFLLRDKRT LDKIHSFQYL 240
  241 APFCLVCSGL LFMGANEEQL ILVLRLGGDH SAYVLIIVSG AFLVYFWMIA CLEFYLYLLE 300
  301 KGKQGFLPKS YELEEENNNV SFELDNISNE DVDEDTTPFN V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle