YRC Public Data Repository - Protein Structure Prediction

Protein:	YOR31_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	218 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR31_YEAST.

Description	E-value	Query Range	Subject Range
gi\|151945752 - gi\|151945752\|gb\|EDN63993.1\| conserved protein [Saccharomyces cerevisiae YJM789] YOR131C - Putative protein of unknown function; non-essential gene; overexpression causes a cell cycle delay o... gi\|190407459 - gi\|190407459\|gb\|EDV10726.1\| hypothetical protein SCRG_01526 [Saccharomyces cerevisiae RM11-1a] YOR31_YEAST - Putative uncharacterized hydrolase YOR131C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...	3.0E-41	[1..218]	[1..218]
SGGP_ARATH - Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana GN=SGPP ...	7.0E-37	[5..217]	[14..244]
EG11871 - phosphoglycolate phosphatase / Phosphoglycolate phosphatase; in dam operon; involved in degradation ... gi\|194421583, gi... - gi\|83585104\|ref\|ZP_00923756.1\| COG0546: Predicted phosphatases [Escherichia coli 101-1], gi\|19443949... gi\|75211751, gi\|... - gi\|75211751\|ref\|ZP_00711815.1\| COG0546: Predicted phosphatases [Escherichia coli B171], gi\|194426923... gi\|238902476, gi... - gi\|238902476\|ref\|YP_002928272.1\| phosphoglycolate phosphatase [Escherichia coli BW2952], gi\|23886204... gi\|191167879, gi... - gi\|75228961\|ref\|ZP_00715553.1\| COG0546: Predicted phosphatases [Escherichia coli B7A], gi\|191167879\|... gi\|251786638, gi... - gi\|251786638\|ref\|YP_003000942.1\| hypothetical protein B21_03189 [Escherichia coli BL21], gi\|24237891... gi\|193061794, gi... - gi\|75260326\|ref\|ZP_00731594.1\| COG0546: Predicted phosphatases [Escherichia coli E22], gi\|193061794\|... gi\|253771788, gi... - gi\|254290063\|ref\|YP_003055811.1\| phosphoglycolate phosphatase [Escherichia coli BL21(DE3)], gi\|25397... gi\|89110625, gi\|... - gi\|89110625\|ref\|AP_004405.1\| phosphoglycolate phosphatase [Escherichia coli str. K-12 substr. W3110]... gi\|253975214, gi... - gi\|254163313\|ref\|YP_003046421.1\| phosphoglycolate phosphatase [Escherichia coli B str. REL606], gi\|2... GPH_ECOLI - Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP) - Escherichia coli gi\|170082902, gi... - gi\|170082902\|ref\|YP_001732222.1\| phosphoglycolate phosphatase [Escherichia coli str. K-12 substr. DH... EG11871 - phosphoglycolate phosphatase / Phosphoglycolate phosphatase; in dam operon; involved in degradation ...	2.0E-36	[7..217]	[1..249]
gi\|75516147, gi\|... - gi\|75516147\|ref\|ZP_00738265.1\| COG0546: Predicted phosphatases [Escherichia coli 53638], gi\|18849334... gi\|157162861, gi... - gi\|75197316\|ref\|ZP_00707386.1\| COG0546: Predicted phosphatases [Escherichia coli HS], gi\|157162861\|r... gi\|226839055, gi... - gi\|254038549\|ref\|ZP_04872605.1\| phosphoglycolate phosphatase [Escherichia sp. 1_1_43], gi\|226839055\|... gi\|209756690, gi... - pir\|\|C91157 phosphoglycolate phosphatase [imported] - Escherichia coli (strain O157:H7, substrain R... gi\|254795299, gi... - gi\|254795299\|ref\|YP_003080136.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. TW14359... gi\|209397865, gi... - gi\|209397865\|ref\|YP_002272819.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4115]... gi\|15803888, gi\|... - gi\|15803888\|ref\|NP_289924.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 EDL933], gi\|1251... gi\|208741353, gi... - gi\|208821230\|ref\|ZP_03261550.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4042],... gi\|217325172, gi... - gi\|217325172\|ref\|ZP_03441256.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. TW14588]... gi\|124500814, gi... - gi\|124528159\|ref\|ZP_01699492.1\| phosphoglycolate phosphatase [Escherichia coli B], gi\|124500814\|gb\|E... gi\|168779465, gi... - gi\|189002264\|gb\|EDU71250.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4076], gi\|... gi\|168772727, gi... - gi\|187771456\|gb\|EDU35300.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4196], gi\|... gi\|168797152, gi... - gi\|189380127\|gb\|EDU98543.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC508], gi\|1... gi\|168785186, gi... - gi\|189374428\|gb\|EDU92844.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC869], gi\|1... gi\|195934873 - gi\|195934873\|ref\|ZP_03080255.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4024] GPH_ECO57 - Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph PE=3 SV=1 gi\|15833481, gi\|... - gi\|15833481\|ref\|NP_312254.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|170018379, gi... - gi\|170018379\|ref\|YP_001723333.1\| phosphoglycolate phosphatase [Escherichia coli ATCC 8739], gi\|16975... gi\|208814054, gi... - gi\|208814054\|ref\|ZP_03255383.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4045],... gi\|208727293, gi... - gi\|208807492\|ref\|ZP_03249829.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4206],... gi\|189359166, gi... - gi\|189359166\|gb\|EDU77585.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4401], gi\|... gi\|168751804, gi... - gi\|188014205\|gb\|EDU52327.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4113], gi\|... gi\|189364353, gi... - gi\|189364353\|gb\|EDU82772.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4486], gi\|... gi\|168759406, gi... - gi\|189369601\|gb\|EDU88017.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4501], gi\|...	3.0E-36	[7..217]	[1..249]
gi\|25499690 - pir\|\|F96977 probable phosphatase [imported] - Clostridium acetobutylicum gi\|15893920, gi\|... - gi\|15893920\|ref\|NP_347269.1\| phosphatase [Clostridium acetobutylicum ATCC 824], gi\|15023504\|gb\|AAK78...	4.0E-35	[13..209]	[2..215]
PPAX_BACHD - Pyrophosphatase ppaX OS=Bacillus halodurans GN=ppaX PE=3 SV=1 PPAX_BACHD - Pyrophosphatase PpaX OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 ...	6.0E-35	[13..210]	[3..210]
GPH_SALTI - Phosphoglycolate phosphatase OS=Salmonella typhi GN=gph PE=3 SV=1 GPH_SALTI - Phosphoglycolate phosphatase OS=Salmonella typhi GN=gph PE=3 SV=1 gi\|16762805 - gi\|16762805\|ref\|NP_458422.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica serov...	7.0E-35	[7..216]	[1..248]
gi\|7225850, gi\|1... - gi\|7225850\|gb\|AAF41046.1\| phosphoglycolate phosphatase [Neisseria meningitidis MC58], gi\|15676523\|re... gi\|11353842 - pir\|\|A81178 phosphoglycolate phosphatase NMB0620 [imported] - Neisseria meningitidis (strain MC58 se...	2.0E-34	[13..213]	[2..218]
GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) G... GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae GN=gph PE=3 SV=1	2.0E-34	[11..210]	[3..224]
GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida (strain Pm70) GN=gph PE=3 SV=1 GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida GN=gph PE=3 SV=1	4.0E-34	[10..211]	[1..224]

Back

Predicted Domain #1

Region A:
Residues: [1-218]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLQGLQGL KHIKAVVFDM DGTLCLPQPW MFPAMRNAIG LEDKSIDILH FIDTLPTEKE  60
   61 KKEAHDRIEL VEAKAMKEMQ PQPGLVDIMR YLTKNGISKN ICTRNVGAPV ETFVKRFIPS 120
  121 ELSRFDYIVT REFRPTKPQP DPLLHIASKL NIRPLEMIMV GDSFDDMKSG RSAGCFTVLL 180
  181 KNHVNGHLLL EHKELVDVSV EDLSEIIELI QNMNKESF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	65.519517
Match:	1fezA_
Description:	Phosphonoacetaldehyde hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.55296860681783	bayes_pls_golite062009
hydrolase activity	0.996930438913923	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: