Protein: | YMS4_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 434 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMS4_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..434] | [1..434] |
|
1.0E-63 | [16..400] | [8..340] |
|
4.0E-63 | [23..400] | [8..332] |
|
4.0E-63 | [23..400] | [8..332] |
|
9.0E-61 | [11..400] | [9..347] |
|
2.0E-60 | [23..400] | [8..332] |
|
2.0E-60 | [23..400] | [8..332] |
|
2.0E-58 | [9..403] | [17..356] |
|
4.0E-58 | [19..381] | [5..314] |
|
3.0E-57 | [14..393] | [13..337] |
Region A: Residues: [1-352] |
1 11 21 31 41 51 | | | | | | 1 MKTQYSLIRK IWAHSVTEFL KSQWFFICLA ILIVIARFAP NFARDGGLIK GQYSIGYGCV 60 61 AWIFLQSGLG MKSRSLMANM LNWRAHATIL VLSFLITSSI VYGFCCAVKA ANDPKIDDWV 120 121 LIGLILTATC PTTVASNVIM TTNAGGNSLL CVCEVFIGNL LGAFITPALV QMFTNRAPFA 180 181 YGNPATGNGI GALYGRVMKQ VGLSVFVPLF VGQVIQNCFP KGTAYYLGFL KKYHIKIGSY 240 241 MLLLIMFSSF STAFYQDAFT SVSHVCIIFL CFFNLGIYIF FTGLSYLCAR PWFILKLFPH 300 301 EPIEGKSTRL YRYSYNIFRP FYYSKEDAIC IMFCGPAKTA ALGVSLITSQ YG |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [353-434] |
1 11 21 31 41 51 | | | | | | 1 DKKEHLGKLL VPLVLYQVEQ VMTANFFVSL FKRWIQKDAQ ADGSESSCAN ENEEVDLEKI 60 61 ISIGTGENQS VLSNNVPYTQ PR |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.481 | a.64.1 | Saposin |
View | Download | 0.787 | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.449 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
View | Download | 0.397 | a.24.4 | Hemerythrin |
View | Download | 0.435 | a.59.1 | PAH2 domain |
View | Download | 0.367 | a.4.1 | Homeodomain-like |
View | Download | 0.364 | a.74.1 | Cyclin-like |
View | Download | 0.358 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
View | Download | 0.356 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
View | Download | 0.355 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
View | Download | 0.353 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
View | Download | 0.352 | d.42.1 | POZ domain |
View | Download | 0.313 | a.6.1 | Putative DNA-binding domain |
View | Download | 0.302 | a.112.1 | Description not found. |
View | Download | 0.284 | d.29.1 | Ribosomal protein L31e |
View | Download | 0.276 | a.47.2 | t-snare proteins |
View | Download | 0.275 | d.150.1 | 4'-phosphopantetheinyl transferase |
View | Download | 0.272 | a.61.1 | Retroviral matrix proteins |
View | Download | 0.267 | d.150.1 | 4'-phosphopantetheinyl transferase |
View | Download | 0.267 | a.24.17 | Group V grass pollen allergen |
View | Download | 0.265 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.264 | a.7.6 | Ribosomal protein S20 |
View | Download | 0.249 | a.17.1 | p8-MTCP1 |
View | Download | 0.237 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
View | Download | 0.233 | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.229 | a.21.1 | HMG-box |
View | Download | 0.226 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
View | Download | 0.209 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
View | Download | 0.208 | a.46.1 | Methionine synthase domain |
Region A: Residues: [320-434] |
1 11 21 31 41 51 | | | | | | 1 PFYYSKEDAI CIMFCGPAKT AALGVSLITS QYGDKKEHLG KLLVPLVLYQ VEQVMTANFF 60 61 VSLFKRWIQK DAQADGSESS CANENEEVDL EKIISIGTGE NQSVLSNNVP YTQPR |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.787 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.481 | N/A | N/A | a.64.1 | Saposin |
View | Download | 0.449 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
View | Download | 0.435 | N/A | N/A | a.59.1 | PAH2 domain |
View | Download | 0.426 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |