| Protein: | YK55_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 307 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YK55_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
254.0 | [0..1] | [126..1] |
|
|
212.0 | [0..1] | [269..1] |
|
|
163.0 | [0..3] | [251..5] |
|
|
157.0 | [0..3] | [120..2] |
|
|
52.0 | [0..2] | [117..122] |
|
|
51.0 | [0..28] | [152..32] |
|
|
50.0 | [0..28] | [117..115] |
|
|
50.0 | [0..18] | [152..134] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MTSLDDTIIS YQNIMLLDNM TNYNKPAIDY FHHEFNDASL EISASWTLLL KMRKHKLLRL 60
61 PSCSSEDVLD YNMYLVRLHH CLWRRWSINH YGLQNSKSNP LSINWNKETD VTVLYGPDLT 120
121 NIDSNENEIS PVQNQIDQKQ TKNLKSALKK NTECWVTEEV DEINASIESN DNALVKLEDI 180
181 SCPSSVDSHT SSIFDQH
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.635 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.505 | N/A | N/A | d.104.1 | Class II aaRS and biotin synthetases |
| View | Download | 0.500 | N/A | N/A | d.58.29 | Adenylyl and guanylyl cyclase catalytic domain |
| View | Download | 0.500 | N/A | N/A | d.58.29 | Adenylyl and guanylyl cyclase catalytic domain |
| View | Download | 0.493 | N/A | N/A | f.19.1 | Aquaporin-like |
| View | Download | 0.488 | N/A | N/A | a.170.1 | BRCA2 helical domain |
| View | Download | 0.488 | N/A | N/A | a.170.1 | BRCA2 helical domain |
| View | Download | 0.474 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.405 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.365 | N/A | N/A | a.182.1 | GatB/YqeY domain |
|
Region A: Residues: [198-307] |
1 11 21 31 41 51
| | | | | |
1 STCTKISSID EDSEDLMNEK KEQFPRKLKF NQAVMKREID SKGTIRESLI NINDIQHSRH 60
61 HRRHHRRHHH HHHQNSSHSD ETIKEAHYEF SNYTFGTMEE DIFYRNQVVF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.691 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.620 | a.118.1 | ARM repeat |
| View | Download | 0.604 | a.118.1 | ARM repeat |
| View | Download | 0.494 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.494 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.473 | a.46.1 | Methionine synthase domain |
| View | Download | 0.469 | a.29.10 | Description not found. |
| View | Download | 0.397 | a.118.8 | TPR-like |
| View | Download | 0.359 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.329 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
