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View Structure Prediction Details

Protein: YIW0_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIW0_YEAST.

Description E-value Query
Range
Subject
Range
YCR103C - YCR103C, Chr III from 305975-306310, reverse complement
179.0 [0..1] [110..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMTLFLNES YIFHRLRMWS IVLWHSCVFV CAECGNANYR VPRCLIKPFS VPVTFPFSVK  60
   61 KNIRILDLDP RTEAYCLSPY SVCSKRLPCK KYFYLLNSYN IKRVLGVVYC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.261 d.15.6 Superantigen toxins, C-terminal domain
View Download 0.255 d.15.6 Superantigen toxins, C-terminal domain
View Download 0.241 c.49.1 Pyruvate kinase, C-terminal domain
View Download 0.241 c.49.1 Pyruvate kinase, C-terminal domain
View Download 0.241 d.15.6 Superantigen toxins, C-terminal domain
View Download 0.241 d.15.6 Superantigen toxins, C-terminal domain
View Download 0.237 d.73.1 RuBisCO, small subunit
View Download 0.226 d.15.6 Superantigen toxins, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle