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View Structure Prediction Details

Protein: YD206_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 762 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YD206_YEAST.

Description E-value Query
Range
Subject
Range
YDL206W - Putative protein of unknown function; YDL206W is not an essential protein
YD206_YEAST - Putative cation exchanger YDL206W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL206...
0.0 [1..762] [1..762]
ncx-9 - status:Partially_confirmed UniProt:O16242 protein_id:AAB65309.1
3.0E-79 [320..762] [215..648]
NCKX1_RAT - Sodium/potassium/calcium exchanger 1 OS=Rattus norvegicus GN=Slc24a1 PE=2 SV=1
4.0E-63 [16..286] [401..664]
NCKX1_BOVIN - Sodium/potassium/calcium exchanger 1 OS=Bos taurus GN=SLC24A1 PE=1 SV=2
3.0E-62 [23..282] [438..687]
gi|21450183, gi|... - gi|21450183|ref|NP_659062.1| solute carrier family 24 (sodium/potassium/calcium exchanger), member 1...
4.0E-62 [16..286] [401..664]
gi|18913078 - gi|18913078|gb|AAL79511.1| cation-exchanger protein 1 [Tetrahymena thermophila]
9.0E-62 [355..757] [188..586]
SLC24A1 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
2.0E-59 [23..287] [444..699]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKPLRWLIT IAFYVSNVIL IGYSLSSNGS ISEFYLHSVV LIECFSLLGV VTSDCLTPSL  60
   61 SYISSNIFHI SDRVSGMTLL ALGNALPDIT STYQSMKSGV TSLAIGELFG GIFFLLTVVI 120
  121 GLMGCVATIQ FQHDKSIETY TEESFDQNLS YDRSNYILDV GIFTFMLLVS GTFLADGRLY 180
  181 FWECIVMVLT YCCCAVYLIK SYKYPCEIND ALEREVEIKK TVLAN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.259637
Match: PF01699
Description: Sodium/calcium exchanger protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [226-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHITVPNRFT LTTTSDITST DDGIRYVRPL GDTQIDEDNA ISLDPTRLPS KSLDNISRFN  60
   61 QGIPERRDLI RRRIRGYLRS HYHGWVRMTL QDLLNIWEKQ NLFNNTVKSL SL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [338-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSDDTHLFTK ASLDEEGRPL IRKRMNSLQP KDFYKYLSLR NGENSNALDT AISAPQNEYQ  60
   61 TYYNEPTSLF LTVPQKKTSK KSLSCDRIPN LVRSNNIILN DEATRTQEST NALNSISDVI 120
  121 DNSLLQYERD DIILDRTLSL CSTKSRTAWH SFQLYNYLTD VSLEIGFFEF LSLLVTTPVS 180
  181 IILYLSIPSE ISQTDHDLPL SYLQNIQLIA SPIILNQLIT NNFSFWLLIL SLVIAILLYF 240
  241 KTRTIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [584-762]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKFNSDIIFT VAFLLSLACL SKAVHIIVVT LTHWINVFNI SETILGLTIF TWGNSIGDLV  60
   61 SNITFVKIGV LEIAIGACFG SPLLYFLFGV GFDGIMIMLG DKTGKIVSGR DSNILMHHID 120
  121 FKVDKNLINT GVGILIAFLI FTVLIPLNDW KIDKKISIAL LTLYIVVTCI SVFLEVHQV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.958607
Match: PF01699
Description: Sodium/calcium exchanger protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle