| Protein: | YBI1_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 368 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBI1_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..368] | [1..368] |
|
|
2.0E-4 | [21..233] | [28..245] |
|
|
6.0E-4 | [152..356] | [637..835] |
|
|
0.003 | [168..357] | [74..254] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MPGQIISIPF LSQNEDMDKY LLEYRSLKLL HQSSNSFQSH NAPSHQSNYH PHYNHMKYNN 60
61 TGSYYYYNNN NNSSVNPHNQ AGLQSINRSI PSAPYGAYNQ NRANDVPYMN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.370 | a.74.1 | Cyclin-like |
| View | Download | 0.370 | a.74.1 | Cyclin-like |
| View | Download | 0.264 | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.246 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.246 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.240 | d.110.4 | SNARE-like |
| View | Download | 0.240 | d.110.4 | SNARE-like |
| View | Download | 0.239 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.235 | d.52.2 | GMP synthetase C-terminal dimerisation domain |
| View | Download | 0.227 | a.24.4 | Hemerythrin |
| View | Download | 0.218 | a.1.1 | Globin-like |
| View | Download | 0.218 | a.1.1 | Globin-like |
| View | Download | 0.210 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.204 | a.74.1 | Cyclin-like |
|
Region A: Residues: [111-368] |
1 11 21 31 41 51
| | | | | |
1 TQKKHHRFSA NNNLNQQKYK QYPQYTSNPM VTAHLKQTYP QLYYNSNVNA HNNNNNSNNN 60
61 NNNNNNSNNN NNLYNQTQFS TRYFNSNSSP SLTSSTSNSS SPYNQSTFEY ILPSTSAAST 120
121 NLSSSSSNNS MHTNPTTATS TSADLINDLP VGPTSSSLIS DLHSPPTVSF LPASQTLLMS 180
181 STTSSSIGTN INPPQHSPSP SQREDFSTAP VNMSSSASLL MNDSSLGWGS NHMNVSSSSQ 240
241 PASSRPFGIW NTDMSVWS
|
| Detection Method: | |
| Confidence: | 14.29 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
