| Protein: | VHC1_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 1120 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VHC1_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1120] | [1..1120] |
|
|
0.0 | [13..876] | [231..1151] |
|
|
0.0 | [13..876] | [233..1153] |
|
|
0.0 | [13..876] | [240..1160] |
|
|
0.0 | [13..876] | [232..1149] |
|
|
0.0 | [13..876] | [212..1139] |
|
Region A: Residues: [1-548] |
1 11 21 31 41 51
| | | | | |
1 MVSRFYQIPG THRPSSAISS SNESSSLLSA RRISQTYFNY QATPECQKVS SKYDPDNPNK 60
61 DKLGTYDGVF VPTALNVLSI LMFLRFGFIL GQLGIICTIG LLLLSYTINL LTTLSISAIS 120
121 TNGTVRGGGA YYMISRSLGP EFGGSIGLVF FLGQVFNAGM NAVGIIEPLL YNLGYSAQGE 180
181 PPAALGELLP RGHWHEFTYA TVILFLCFSV AFVGSQTVSR AGNILFLVLA ASIFSIPLSA 240
241 LIRSPFTEGG ISYTGPSWQT FHDNLLPHLT KGAAGSLLKG KETFNDLFGV FFPATAGIFA 300
301 GAGMSSELRK PSKSIPKGTL WGLLFTFICY AVVVFSMGCS IPRRSLYDEV QIIQTISSVQ 360
361 WVIFMGEMAT SLFSIIVGML GAAYVLEAIA KDNIIPGLEI FAHSPLYSLI FTWILTQLCL 420
421 FSDVNKIATF ITMTFLMTFV VMNLACFLLG ISSAPNFRPS FKYFNRYTTA IGALLSVVAM 480
481 LIVDGISASV LFLAMILLFL FIHYFSPPKS WGDVSQSLIY HQVRKYLLRL RQDNIKYWRP 540
541 QILLFVDN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [549-750] |
1 11 21 31 41 51
| | | | | |
1 PRTSWNLIRF CNHLKKGGLY ILGHVAVTAD FPKQLNELKT QQKAWMKIRD MAAIKAFVQV 60
61 GTGPSLIWGI RNVFIGSGLG GMKPNITVVG FFDLESYRKH IPQSRSQNNL QKQVEIKATV 120
121 PRSTCSDVKI NVPLPTDECK NETKVNVQQW VQIVEDLSLM QSNIAIAHGF KNLEIPNKRD 180
181 SCFPKKTIDL YPIQMCGKVE AK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [751-903] |
1 11 21 31 41 51
| | | | | |
1 GDQPAAITTN FDTYTLILQL AAILVTVPEW KRTHSLRVIL FVEQEYHRTN ETQRMKKLLQ 60
61 VLRIDAEVLV VSLDQFRVYN TIVKGDPIVF DYVNSKLADN EWWKDLVEAR DTLKPKRRFS 120
121 TIEPQTIAKQ FTQSRKYTSG VQKLGVSFTM NTR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [904-1120] |
1 11 21 31 41 51
| | | | | |
1 MPTNRIDTPC ESEDSDLDTD LTSIRDAFSA STNISVGKDL TTKSKTGSDR TNLLVKNLQS 60
61 DVSTQSLRPV FSSNTLPRTR VVEDGTGEQP TLIPIAEPDL SNGNGTGSGI GNGNKLKKPV 120
121 LPELSPCCSK DSLVTAMQNL GFNDLPSTAQ HLVLNDVMTQ MSKSSDLIFS TLPVPALGTH 180
181 EDHDASLQYV EDLDIWLEGL PPCMLINSQT MTVTTAL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1028-1120] |
1 11 21 31 41 51
| | | | | |
1 SPCCSKDSLV TAMQNLGFND LPSTAQHLVL NDVMTQMSKS SDLIFSTLPV PALGTHEDHD 60
61 ASLQYVEDLD IWLEGLPPCM LINSQTMTVT TAL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
