YRC Public Data Repository - Protein Structure Prediction

Protein:	TOM7_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	60 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOM7_YEAST.

Description	E-value	Query Range	Subject Range
gi\|49527464 - gi\|49527464\|emb\|CAG61104.1\| unnamed protein product [Candida glabrata] gi\|50291441, gi\|... - gi\|50291441\|ref\|XP_448153.1\| unnamed protein product [Candida glabrata], gi\|49527464\|emb\|CAG61104.1\|...	96.0	[0..1]	[60..1]
gi\|49644429, gi\|... - gi\|50310547\|ref\|XP_455293.1\| unnamed protein product [Kluyveromyces lactis], gi\|49644429\|emb\|CAG9800...	96.0	[0..1]	[60..1]
gi\|85101402 - gi\|85101402\|ref\|XP_961141.1\| hypothetical protein NCU04181 [Neurospora crassa OR74A] gi\|13324618, gi\|... - gi\|32405816\|ref\|XP_323521.1\| hypothetical protein [Neurospora crassa], gi\|28922681\|gb\|EAA31905.1\| pr...	83.0	[0..7]	[57..2]
gi\|76573622 - gi\|76573622\|dbj\|BAE44706.1\| hypothetical protein [Candida albicans] gi\|77022730 - gi\|77022730\|ref\|XP_888809.1\| hypothetical protein CaJ7_s008 [Candida albicans SC5314]	78.0	[0..9]	[59..14]
gi\|44984035 - gi\|44984035\|gb\|AAS53045.1\| AER365Wp [Ashbya gossypii ATCC 10895] gi\|45190967, gi\|... - gi\|45190967\|ref\|NP_985221.1\| AER365Wp [Ashbya gossypii ATCC 10895], gi\|44984035\|gb\|AAS53045.1\| AER36...	74.0	[0..1]	[45..1]
gi\|49652229 - gi\|49652229\|emb\|CAG84521.1\| DEHA2A05588p [Debaryomyces hansenii] gi\|50405849, gi\|... - gi\|50405849\|ref\|XP_456565.1\| hypothetical protein DEHA0A05632g [Debaryomyces hansenii CBS767], gi\|49...	74.0	[0..9]	[59..10]
gi\|42553314, gi\|... - gi\|46125927\|ref\|XP_387517.1\| hypothetical protein FG07341.1 [Gibberella zeae PH-1], gi\|42553314\|gb\|E...	73.0	[0..7]	[52..2]
gi\|111062320 - gi\|111062320\|gb\|EAT83440.1\| predicted protein [Phaeosphaeria nodorum SN15]	69.0	[0..7]	[52..2]
tom7 - mitochondrial TOM complex subunit Tom7 TOM7_SCHPO - Mitochondrial import receptor subunit tom7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN...	66.0	[0..9]	[42..3]
gi\|114191718, gi... - gi\|115398492\|ref\|XP_001214835.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	63.0	[0..10]	[48..5]

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Predicted Domain #1

Region A:
Residues: [1-60]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLPSFILS DESKERISKI LTLTHNVAHY GWIPFVLYLG WAHTSNRPNF LNLLSPLPSV  60
   61

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.483	a.182.1	GatB/YqeY domain
View	Download	0.414	a.140.1	LEM domain
View	Download	0.402	a.5.1	DNA helicase RuvA subunit, C-terminal domain
View	Download	0.396	a.182.1	GatB/YqeY domain
View	Download	0.381	a.77.1	DEATH domain
View	Download	0.364	a.60.4	DNA repair protein Rad51, N-terminal domain
View	Download	0.338	a.5.7	4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View	Download	0.324	a.140.2	SAP domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits