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View Structure Prediction Details

Protein: SVS1_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SVS1_YEAST.

Description E-value Query
Range
Subject
Range
SVS1 - Cell wall and vacuolar protein, required for wild-type resistance to vanadate
SVS1_YEAST - Protein SVS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SVS1 PE=1 SV=1
6.0E-58 [1..260] [1..260]
gi|6164595 - gi|6164595|gb|AAF04457.1|AF078161_1 lacunin [Manduca sexta]
3.0E-5 [24..252] [1281..1506]
gi|13492037, gi|... - gi|15722002|gb|AAL04416.1| zonadhesin [Mus musculus], gi|13517499|gb|AAK28824.1|AF312033_9 ZAN [Mus ...
5.0E-5 [18..226] [648..862]

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Predicted Domain #1
Region A:
Residues: [1-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFKILCSLL LVTSNFASAL YVNETTSYTP YTKTLTPTYS VSPQETTLTY SDETTTFYIT  60
   61 STFYSTYWFT TSQSAAIIST PTASTPTAST PSLTTSTNEY TTTYSDTDTT YTSTLTSTYI 120
  121 ITLSTESANE KAEQISTSVT EIASTVTESG STYTSTLTST LLVTVYNSQA SNTIATSTAG 180
  181 DAASNVDALE KLVSAEHQSQ MIQTTSADEQ YCSASTKYVT VTAAAVTEVV TTTAEPVVKY 240
  241 VTITADASNV TGSANNGTHI 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TASTPTASTP SLTTSTNEYT TTYSDTDTTY TSTLTSTYII TLSTESANEK AEQISTSVTE  60
   61 IASTVTESGS TYTSTLTSTL LVTVYNSQAS NTIATSTAGD AASNVDALEK LVSAEHQSQM 120
  121 IQTTSADEQY CSASTKYVTV TAAAVTEVVT TTAEPVVKYV TITADASNVT GSANNGTHI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle