YRC Public Data Repository - Protein Structure Prediction

Protein:	SRL1_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	210 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRL1_YEAST.

Description	E-value	Query Range	Subject Range
gi\|151945333 - gi\|151945333\|gb\|EDN63576.1\| suppressor of rad53 null lethality [Saccharomyces cerevisiae YJM789] SRL1_YEAST - Cell wall protein SRL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRL1 PE=1 SV=1 SRL1 - Mannoprotein that exhibits a tight association with the cell wall, required for cell wall stability ... gi\|207340974 - gi\|207340974\|gb\|EDZ69159.1\| YOR247Wp-like protein [Saccharomyces cerevisiae AWRI1631]	1.0E-41	[1..210]	[1..210]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	3.0E-5	[17..209]	[1108..1273]

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Predicted Domain #1

Region A:
Residues: [1-210]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQSVVFFAL LTFASSVSAI YSNNTVSTTT TLAPSYSLVP QETTISYADD TTTFFVTSTV  60
   61 YSTSWFTSTS ATITNAASSS LSTSSASGSV TPESTHEITS TSTITSTLLL TLHDSTTLSP 120
  121 SSTAASVSDE DSNNKDAKVK SFEQASTSNG CVPITKFVTV TNEPVTQYVT VTPNTTTQYV 180
  181 TVTGAPSVTT TSPGNVQWYN TTSITNSTSW

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits