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View Structure Prediction Details

Protein: SNO2_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 222 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNO2_YEAST.

Description E-value Query
Range
Subject
Range
gi|190409296 - gi|190409296|gb|EDV12561.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207345759, gi... - gi|207345759|gb|EDZ72473.1| YFL060Cp-like protein [Saccharomyces cerevisiae AWRI1631], gi|207342009|...
gi|151944606 - gi|151944606|gb|EDN62883.1| conserved protein [Saccharomyces cerevisiae YJM789]
SNO2 - Protein of unknown function, nearly identical to Sno3p; expression is induced before the diauxic shi...
SNO2_YEAST - Probable pyridoxal 5'-phosphate synthase subunit SNO2 OS=Saccharomyces cerevisiae (strain ATCC 20450...
2.0E-44 [1..222] [1..222]
HIS5_CORGL - Imidazole glycerol phosphate synthase subunit HisH OS=Corynebacterium glutamicum (strain ATCC 13032 ...
HIS5_CORGL - Imidazole glycerol phosphate synthase subunit HisH OS=Corynebacterium glutamicum GN=hisH PE=3 SV=2
7.0E-36 [1..215] [1..211]
PYRG_BACHD - CTP synthase OS=Bacillus halodurans GN=pyrG PE=3 SV=1
PYRG_BACHD - CTP synthase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)...
1.0E-35 [3..218] [292..532]
PYRG_LISMO - CTP synthase OS=Listeria monocytogenes GN=pyrG PE=3 SV=1
gi|224500487 - gi|224500487|ref|ZP_03668836.1| CTP synthetase [Listeria monocytogenes Finland 1988]
gi|224503651 - gi|224503651|ref|ZP_03671958.1| CTP synthetase [Listeria monocytogenes FSL R2-561]
gi|153192239, gi... - gi|153192239|ref|ZP_01939259.1| CTP synthase [Listeria monocytogenes J2818], gi|127764299|gb|EBA2483...
gi|133729042, gi... - gi|153175829|ref|ZP_01931116.1| CTP synthase [Listeria monocytogenes FSL N3-165], gi|133729042|gb|EB...
gi|254938185, gi... - gi|254938185|ref|ZP_05269882.1| CTP synthetase [Listeria monocytogenes F6900], gi|153180671|ref|ZP_0...
gi|47097102, gi|... - gi|47097102|ref|ZP_00234671.1| CTP synthase [Listeria monocytogenes str. 1/2a F6854], gi|47014507|gb...
PYRG_LISMO - CTP synthase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=pyrG PE=3 SV=1
gi|254900990 - gi|254900990|ref|ZP_05260914.1| CTP synthetase [Listeria monocytogenes J0161]
4.0E-35 [2..219] [290..532]
PYRG_CLOAB - CTP synthase OS=Clostridium acetobutylicum GN=pyrG PE=3 SV=1
PYRG_CLOAB - CTP synthase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-...
8.0E-35 [3..216] [292..527]
gi|85106827 - gi|85106827|ref|XP_962256.1| pyridoxine-2 [Neurospora crassa OR74A]
gi|32411847, gi|... - gi|32411847|ref|XP_326404.1| hypothetical protein ( (AF309689) Sno-type pyridoxine vitamin B6 biosyn...
8.0E-35 [3..221] [11..243]
PYRG_LISIN - CTP synthase OS=Listeria innocua GN=pyrG PE=3 SV=1
PYRG_LISIN - CTP synthase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=pyrG PE=3 SV=1
8.0E-35 [2..219] [290..532]
gi|13937025 - gi|13937025|gb|AAK50016.1|AF363613_1 pyridoxine [Aspergillus nidulans]
gi|40738737, gi|... - gi|67539942|ref|XP_663745.1| hypothetical protein AN6141.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
1.0E-34 [2..215] [3..263]

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Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVVIGVLAL QGAFIEHVRH VEKCIVENRD FYEKKLSVMT VKDKNQLAQC DALIIPGGES  60
   61 TAMSLIAERT GFYDDLYAFV HNPSKVTWGT CAGMIYISQQ LSNEEKLVKT LNLLKVKVKR 120
  121 NAFGRQAQSS TRICDFSNFI PHCNDFPATF IRAPVIEEVL DPEHVQVLYK LDGKDNGGQE 180
  181 LIVAAKQKNN ILATSFHPEL AENDIRFHDW FIREFVLKNY SK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 1gpmA_
Description: GMP synthetase; GMP synthetase, central domain; GMP synthetase C-terminal dimerisation domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.30391542469987 bayes_pls_golite062009
binding 0.799270855996775 bayes_pls_golite062009
ligase activity 0.606811845310629 bayes_pls_golite062009
anthranilate synthase activity 0.198608229600186 bayes_pls_golite062009
protein binding 0.0152024556625711 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle