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View Structure Prediction Details

Protein: SGO1_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 590 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGO1_YEAST.

Description E-value Query
Range
Subject
Range
SGO1 - Component of the spindle checkpoint, involved in sensing lack of tension on mitotic chromosomes; pro...
SGO1_YEAST - Shugoshin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGO1 PE=1 SV=1
0.0 [1..590] [1..590]
sgo1 - shugoshin Sgo1
SGO1_SCHPO - Shugoshin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sgo1 PE=1 SV=1
0.0 [31..389] [9..301]

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Predicted Domain #1
Region A:
Residues: [1-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRKIAPNK ESSRRTVSHD DLTPQIQEFQ NLMDLESQKV ENIRQSYSRQ NSLLAKDNSI  60
   61 LKIKVNSLEK KISQLVQENV TLRSKTSISE AIYRERLSNQ LQVIENGIIQ RFDEIFYMFE 120
  121 NVRKNENLPS SSLRTMLKRT SSRSRSCSLS SPTYSKSYTR LSNHENNLSH ESSFNKDDGP 180
  181 DLEPKAKKRK SSRRQSMFVS TSLEPEDETG ENEPMMENSS VEVPAESHES AQVEETIDAL 240
  241 NPEEENSDSV SNFTNSIIEY SIPEENPTEP EHSSSKLEIF NDSTNMLSTV PSNPLPLPLP 300
  301 GPSATLPTTT SDASTVYPSS SSSTNSHPKT KIKHSMKPPR IELKKKVIDE VMPVSNMSSN 360
  361 SEISFTRTRR TRGKAVDYTL PSLRAKMRRP SEKLVDATTV IDIHDLQVSK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [411-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNRETSHKRK SLSQDSIPDE PQLREVVVSK DYGTPKGKKT EDEIHEDTAH LMTTSNNNSN  60
   61 NKNEKKLTSN NSPKKSSPLL DITNKSENKK KSTRTKKLFK NAIVNNLSDE NSTTRPSKSS 120
  121 KGTSNNNNNY NNFDNNNSNI NNVNNKSVSF RLNEDDLAVF DLFGNGKAVK HQPKTYRTKK 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [449-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTEDEIHEDT AHLMTTSNNN SNNKNEKKLT SNNSPKKSSP LLDITNKSEN KKKSTRTKKL  60
   61 FKNAIVNNLS DENSTTRPSK SSKGTSNNNN NYNNFDNNNS NINNVNNKSV SFRLNEDDLA 120
  121 VFDLFGNGKA VKHQPKTYRT KK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle