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View Structure Prediction Details

Protein: RTC4_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RTC4_YEAST.

Description E-value Query
Range
Subject
Range
RTC4 - Protein of unknown function; null mutation suppresses cdc13-1 temperature sensitivity; (GFP)-fusion ...
RTC4_YEAST - Restriction of telomere capping protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
0.0 [1..401] [1..401]

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Predicted Domain #1
Region A:
Residues: [1-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGPGLGINR VRRKGVYSTK KGSGDNLLLM KRQGKHDIHD RESDDLSGHD AFSPSKKRGK  60
   61 IDSITEDEIE VKKLSTVATF DKLSRSFPNS EVQAAKNAAL RGKEKEEEKV VSIPLIQNLK 120
  121 NEDIESIKCR NNNLLDGKKL LLEAELSAVE DNQIFSSSFP EDKKLSLQSC LSSKEQIIKK 180
  181 LQVREEYMSK FKLPPMLFSD ELLTEVEPFM PIVMDILEGK ISSVYYFEAK NAFKNSQKAY 240
  241 LSVDEFRKLN LNKFTAGFYG LKRQLRVGEE IAKRYKRALT HNQPATLKWW GITDFCNYVL 300
  301 APETLTSFCI YQLNLSNKSC SSKTPNKHPK QQLNEKEYYY DPELRMLAYD LLEDTVEYGI 360
  361 IVADSDPIEQ WEAAIEEDRL RELKLDVHNY SSRRWRLDTH D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [193-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPPMLFSDEL LTEVEPFMPI VMDILEGKIS SVYYFEAKNA FKNSQKAYLS VDEFRKLNLN  60
   61 KFTAGFYGLK RQLRVGEEIA KRYKRALTHN QPATLKWWGI TDFCNYVLAP ETLTSFCIYQ 120
  121 LNLSNKSCSS KTPNKHPKQQ LNEKEYYYDP ELRMLAYDLL EDTVEYGIIV ADSDPIEQWE 180
  181 AAIEEDRLRE LKLDVHNYSS RRWRLDTHD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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