| Protein: | RM17_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 281 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RM17_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-96 | [1..281] | [1..281] |
|
|
2.0E-77 | [9..280] | [30..278] |
|
|
1.0E-72 | [2..280] | [17..266] |
|
|
7.0E-68 | [9..281] | [28..277] |
|
|
2.0E-59 | [9..279] | [11..258] |
|
|
5.0E-47 | [124..273] | [69..229] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MKVNLMLKRG LATATATASS APPKIKVGVL LSRIPIIKSE LNELEKKYYE YQSELEKRLM 60
61 WTFPAYFYFK KGTVAEHKFL SLQKGPISKK NGIWFPRGIP DIKHGRERST KQEVKLSDDS 120
121 TVAFSNNQKE QSKDDVNRPV IPN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [144-281] |
1 11 21 31 41 51
| | | | | |
1 DRITEADRSN DMKSLERQLS RTLYLLVKDK SGTWKFPNFD LSDESKPLHV HAENELKLLS 60
61 GDQIYTWSVS ATPIGVLQDE RNRTAEFIVK SHILAGKFDL VASKNDAFED FAWLTKGEIS 120
121 EYVPKDYFNK TEFLLADN
|
| Detection Method: | |
| Confidence: | 7.74 |
| Match: | 1kt9A |
| Description: | Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.38338559299412 | bayes_pls_golite062009 |
| binding | 0.881558273069274 | bayes_pls_golite062009 |
| nucleic acid binding | 0.495924061190848 | bayes_pls_golite062009 |
| RNA binding | 0.44030858339937 | bayes_pls_golite062009 |
| protein binding | 0.358912650308843 | bayes_pls_golite062009 |
