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View Structure Prediction Details

Protein: PRM8_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRM8_YEAST.

Description E-value Query
Range
Subject
Range
PRM8_YEAST - Pheromone-regulated membrane protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=P...
PRM8 - Pheromone-regulated protein with 2 predicted transmembrane segments and an FF sequence, a motif invo...
2.0E-93 [1..237] [1..237]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTPSENTNA KSDSLDEPGA YLIEENVALP KDIFHSYLSY WIYEAAHCTP VMLLSLVIGV  60
   61 LISIIILFHD NENCVGVSVG FLLIFSGILV IVLILRFGPQ ISDEDFKCKL LMEIITRKPT 120
  121 VKGKEWRTIT YKMNQYLFDN DLWNTPYYFY RDEDCHRYFL SLIKGRTFKK QKESSASNVK 180
  181 DAQSNDETAG TPNEAAESSS FSAGPNFIKL LTKAAEIEQQ FQKEYWRQEY PGVDEFF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 58.408935
Match: PF00674
Description: DUP family

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle