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View Structure Prediction Details

Protein: PLM2_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 521 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLM2_YEAST.

Description E-value Query
Range
Subject
Range
PLM2 - Forkhead Associated domain containing protein and putative transcription factor found associated wit...
PLM2_YEAST - Protein PLM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PLM2 PE=1 SV=1
0.0 [1..521] [1..521]
YK42_SCHPO - Transcription factor P14E8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP14E8.02 ...
SPAP14E8.02 - transcription factor
2.0E-62 [363..519] [393..549]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHLFPPSSP VAGKPLESPQ KEPGKLANTS VLTLGRKRYN YELEEYPTPD PSSSIGRQSS  60
   61 PVKDITSRLN ETKSALSSPS KQEKVLAGPI EIELDASDPS RLAIGRKKSV CNIILPCRKN 120
  121 ISRQHAFISY AADRNEIKLE CNGTNGLSVH LPYSMQLHLV KPFPTRNFYK LVAEEPLTSQ 180
  181 NTKQSHGKTL QKNQNFISFV LAKGETVTFP YIQGSFINFT GVTVCLSLKK VAP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPGDGNNNFD EENSTETEDE LCLLTTTSDD FSWQKETPSM KFVPVEHSPR TEQISKPLLI  60
   61 ASPALVKNSP ISYRTTPQTS FVINQPSTPK KLKRKSISLK NNTIQETPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.261 d.74.5 Hypothetical protein Yml108w
View Download 0.261 d.74.5 Hypothetical protein Yml108w

Predicted Domain #3
Region A:
Residues: [343-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKDKIIGTLS ASTRSGGINE EESFAAVAKK TKELSSTTAI VSPAQKRLKT SLNIIPEISR  60
   61 SLSERGIRFD DLVHVLCNHL AFSNLQQTPL SQLQNINSNT SQLSKDELKK VLETISCIGI 120
  121 IVREGKDASG KPLEDEYYYD VENDDSDERK ILYNSLKGRS RLRSCRKKHK QYFWKRPTK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle