| Protein: | PALF_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 542 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PALF_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
339.0 | [0..37] | [525..4] |
|
Region A: Residues: [1-269] |
1 11 21 31 41 51
| | | | | |
1 MSLLRLWNKE SRAPSKIKSH GIVGSYGNSM LAHNNVKQFR IDIDEPHRVW KPNESITGEA 60
61 VIDIKRDITN VAIKLSLVCE VRVKTGNSPT SKNKRIEKTL EKSTFLYGQD YVKTAFSAKE 120
121 KKPHVDKTTI LNGLSKGEHR FPFRIRIPRG RGMLSSIKFE RGSITYFLSC TLESLNNING 180
181 LKKPEARCER EFAVIVPLDV SRLPKPKTKT VVLQSASMVQ NKKNKSTEDE SSSYTQLTQK 240
241 STTSNSSSSS VNSKTSPLPN KTVTISVDI
|
| Detection Method: |  |
| Confidence: | 4.54 |
| Match: | 2fauA |
| Description: | No description for 2fauA was found. |
|
Region A: Residues: [270-394] |
1 11 21 31 41 51
| | | | | |
1 PQAGFMIGEI IPIDVKIDHY KPFYAPAGLT TTLVRICRVG GAGKDDPMET FRKDICQSIS 60
61 PIYINPETLQ FQSRVYLKVP LDAFSTLTTV GKFFSFQYYI EVMVNLSKKN VVYTESNRII 120
121 GTPIG
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1cf1A |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.58529827924809 | bayes_pls_golite062009 |
| binding | 1.32791731197699 | bayes_pls_golite062009 |
|
Region A: Residues: [395-542] |
1 11 21 31 41 51
| | | | | |
1 EQNGLGVENN INRIQRKMLR MVNPETLEND SEGYESSIFF KDMVNVEKLK RLRNVTGMSI 60
61 ETVIGTTRSE QQQSDASIPS QSSITAPQNS PSNLRDWLAP LNAYDSDDVP VPKYSPNDKV 120
121 SVPSEDKQEL EQKRLQQLES DPPPCDDY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.267 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
