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View Structure Prediction Details

Protein: OKP1_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OKP1_YEAST.

Description E-value Query
Range
Subject
Range
OKP1 - Outer kinetochore protein, required for accurate mitotic chromosome segregation; component of the ki...
OKP1_YEAST - Central kinetochore subunit OKP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OKP1 PE...
0.0 [1..406] [1..406]
gi|6724280 - gi|6724280|gb|AAC47841.2| CG7 [Plasmodium falciparum]
0.002 [140..275] [842..979]
tag-312 - calcium-binding protein status:Partially_confirmed UniProt:Q22908 protein_id:AAK39204.1
0.002 [30..285] [11..275]

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Predicted Domain #1
Region A:
Residues: [1-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADRDNFLQ NIENDSINNG QAMDLSPNRS SSESDSSILM NVNDIKTLRL DVAPEAKSTQ  60
   61 SKKSLFYENS DDAEEGEIEE RTNKEEGQYH HKGSKQLRFE VGKESTGKLQ SHLSDGSATS 120
  121 GEGNVRPWEF RKVIQAEYRE RLPRNYELKH WKKPSKIMIG SILRLLETNT VSALDSVFEK 180
  181 YEKEMNQMTH GDNNEVKRIY SKKERLLEII LTKIKKKLRQ AKFPSRISER DLDIEYIYSK 240
  241 RQFIQNRYSQ ELQNNERLEA ILSREQNLLE ETRKLCMNLK TNNKKRLTEK LIQKDLHPVL 300
  301 NKAMEYTYGL ESTNGFMHPD GPVTFRNDSH ELNLMLNDPI KSTADVRLDK EEVLSLLPSL 360
  361 KEYTKKSKEL KETMGQMISD SHEEEIKEVF VPHHESHQDK TEEDIH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle