YRC Public Data Repository - Protein Structure Prediction

Protein:	NCE2_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	173 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NCE2_YEAST.

Description	E-value	Query Range	Subject Range
NCE2_YEAST - Non-classical export protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NCE102 PE... gi\|207340247 - gi\|207340247\|gb\|EDZ68657.1\| YPR149Wp-like protein [Saccharomyces cerevisiae AWRI1631] NCE102 - Protein of unknown function; contains transmembrane domains; involved in secretion of proteins that ... gi\|151942921 - gi\|151942921\|gb\|EDN61267.1\| nonclassical export-related protein [Saccharomyces cerevisiae YJM789] gi\|190408072 - gi\|190408072\|gb\|EDV11337.1\| non-classical export protein 2 [Saccharomyces cerevisiae RM11-1a]	1.0E-62	[1..173]	[1..173]
NCE2_SCHPO - Non-classical export protein 2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fhn... SPBC1685.13 - non classical export pathway protein	6.0E-44	[8..143]	[13..150]
gi\|32406764, gi\|... - gi\|32406764\|ref\|XP_323995.1\| predicted protein [Neurospora crassa], gi\|28920584\|gb\|EAA29946.1\| hypot... gi\|85092010 - gi\|85092010\|ref\|XP_959182.1\| hypothetical protein NCU04639 [Neurospora crassa OR74A]	4.0E-31	[8..150]	[7..157]

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Predicted Domain #1

Region A:
Residues: [1-173]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALADNILR IINFLFLVIS IGLISSLLNT QHRHSSRVNY CMFACAYGIF TDSLYGVFAN  60
   61 FIEPLAWPLV LFTLDFLNFV FTFTAGTVLA VGIRAHSCNN SSYVDSNKIT QGSGTRCRQA 120
  121 QAAVAFLYFS CAIFLAKTLM SVFNMISNGA FGSGSFSKRR RTGQVGVPTI SQV

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits