YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MST28_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 234 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MST28_YEAST.

Description E-value Query
Range
Subject
Range
MST28 - Putative integral membrane protein, involved in vesicle formation; forms complex with Mst27p; member...
MST28_YEAST - Multicopy suppressor of SEC21 protein 28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
2.0E-93 [1..234] [1..234]

Back

Predicted Domain #1
Region A:
Residues: [1-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTPPESTDV KLDTLNEPSA HLIEKNVALP KDIFRSYLSY WIYEIARYTP VMILSLVIGV  60
   61 LVLLIIFFND NEACVFNSAI FAFTSLVGLL IILSDGNPKL VSRRNFRTEL LVDVITRKPA 120
  121 VEGKEWRIIT YNMNQYLFNH GQWHTPYYFY SDEDCYRYFL RLVEGVTPKK QTATSIGNSP 180
  181 VTAKPEDAIE SASPSSRLNY QNFLLKAAEI ERQAQENYWR RRHPNIDALL KKTE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 53.958607
Match: PF00674
Description: DUP family

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle