YRC Public Data Repository - Protein Structure Prediction

Protein:	ISD11_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	94 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISD11_YEAST.

Description	E-value	Query Range	Subject Range
BCN92_DROSU - Protein bcn92 OS=Drosophila subobscura GN=bcn92 PE=3 SV=1	123.0	[0..7]	[87..2]
gi\|220952160 - gi\|220952160\|gb\|ACL88623.1\| bcn92-PA [synthetic construct] bcn92-PA - The gene bcn92 is referred to in FlyBase by the symbol Dmel\bcn92 (CG3717, FBgn0013432). It is a pro...	122.0	[0..7]	[87..2]
gi\|125980855, gi... - gi\|54642756\|gb\|EAL31501.1\| GA17638 [Drosophila pseudoobscura pseudoobscura], gi\|125980855\|ref\|XP_001... gi\|54642756\|gb\|E... - GA17638-PA [Drosophila pseudoobscura], GA17638 [Drosophila pseudoobscura pseudoobscura]	121.0	[0..7]	[87..2]
LYRM4 - LYR motif containing 4	116.0	[0..6]	[87..3]
gi\|50734067 - gi\|50734067\|ref\|XP_418962.1\| PREDICTED: similar to chromosome 6 open reading frame 149; CGI-203 prot...	116.0	[0..6]	[87..125]
gi\|16306961 - gi\|16306961\|gb\|AAH09552.1\| LYR motif containing 4 [Homo sapiens] gi\|190689721, gi... - gi\|190691085\|gb\|ACE87317.1\| LYR motif containing 4 protein [synthetic construct], gi\|190689721\|gb\|AC... gi\|55625814 - gi\|55625814\|ref\|XP_518217.1\| PREDICTED: hypothetical protein LOC57128 isoform 2 [Pan troglodytes]	115.0	[0..6]	[87..3]
LYRM4_MOUSE - LYR motif-containing protein 4 OS=Mus musculus GN=Lyrm4 PE=1 SV=1	114.0	[0..6]	[87..3]
LYRM4_BOVIN - LYR motif-containing protein 4 OS=Bos taurus GN=LYRM4 PE=3 SV=1	114.0	[0..6]	[87..3]
gi\|39943160, gi\|... - gi\|39943160\|ref\|XP_361117.1\| hypothetical protein MG03660.4 [Magnaporthe grisea 70-15], gb\|EAA52065....	108.0	[0..4]	[87..7]
ISD11_SCHPO - Protein isd11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isd11 PE=3 SV=1 isd11 - iron sulfur cluster assembly protein Isd11	107.0	[0..8]	[87..4]

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Predicted Domain #1

Region A:
Residues: [1-94]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGFTAPTRR QVLSLYKEFI KNANQFNNYN FREYFLSKTR TTFRKNMNQQ DPKVLMNLFK  60
   61 EAKNDLGVLK RQSVISQMYT FDRLVVEPLQ GRKH

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	14.69897
Match:	PF05347.6
Description:	No description for PF05347.6 was found.

Shown below is our most confident prediction for this domain.
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		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.966	N/A	N/A	a.8.11	Description not found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits