YRC Public Data Repository - Protein Structure Prediction

Protein:	FSF1_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	327 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FSF1_YEAST.

Description	E-value	Query Range	Subject Range
SFXN1 - sideroflexin 1 gi\|117646506 - gi\|117646506\|emb\|CAL38720.1\| hypothetical protein [synthetic construct]	0.0	[1..327]	[1..322]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	0.0	[1..327]	[36..357]
SFXN1_MOUSE - Sideroflexin-1 OS=Mus musculus GN=Sfxn1 PE=1 SV=3	0.0	[1..327]	[1..322]
SFXN3_RAT - Sideroflexin-3 OS=Rattus norvegicus GN=Sfxn3 PE=2 SV=1	0.0	[3..327]	[2..321]
FSF1_YEAST - Probable mitochondrial transport protein FSF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288... gi\|190407573 - gi\|190407573\|gb\|EDV10840.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] FSF1 - Putative protein, predicted to be an alpha-isopropylmalate carrier; belongs to the sideroblastic-ass... gi\|207340954 - gi\|207340954\|gb\|EDZ69146.1\| YOR271Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi\|151945355 - gi\|151945355\|gb\|EDN63598.1\| conserved protein [Saccharomyces cerevisiae YJM789]	0.0	[1..327]	[1..327]

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Predicted Domain #1

Region A:
Residues: [1-327]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVPGPID LPESRYDLST YWGRIRHCAE ISDPTMLLTT EKDLAHAREI ISAYRHGELK  60
   61 ETTPEFWRAK KQLDSTVHPD TGKTVLLPFR MSSNVLSNLV VTVGMLTPGL GTAGTVFWQW 120
  121 ANQSLNVAVN SANANKSHPM STSQLLTNYA AAVTASCGVA LGLNNLVPRL KNISPHSKLI 180
  181 LGRLVPFAAV VSAGIVNVFL MRGNEIRKGI SVFDSNGDEV GKSKKAAFMA VGETALSRVI 240
  241 NATPTMVIPP LILVRLQRGV LKGKSLGVQT LANLGLISVT MFSALPFALG IFPQRQAIHL 300
  301 NKLEPELHGK KDKDGKPIEK VYFNRGI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	195.886057
Match:	PF03820
Description:	Tricarboxylate carrier

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits