YRC Public Data Repository - Protein Structure Prediction

Protein:	ATG34_YEAST
Organism:	Saccharomyces cerevisiae S288c
Length:	412 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG34_YEAST.

Description	E-value	Query Range	Subject Range
YOL083W - Putative protein of unknown function ATG34_YEAST - Autophagy-related protein 34 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG34 PE=1 ...	0.0	[1..412]	[1..412]

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Predicted Domain #1

Region A:
Residues: [1-412]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAVETTLF DFFVIDQFKK STFSAPNTKV DTIKGCINKF IEQFNVYDEQ HIFWQPPGKS  60
   61 NVRLLSNAND FGQLGNFLHK KIKCNIFIGE EALRKYDLNI CGPYDKFVEN SDPSVKKVVN 120
  121 RDDVMLSRKC LNIISEQLSI LEKSISKAQN QVLQSSEVEG KKCIILPEDK PELIKFFSKF 180
  181 ETSVQLQEVY EGYKVYEKLL QKFGGQKKRM ESFLNENTPM SGAEAIKQIN ISEELKEKGE 240
  241 RLTTPNDPLL HVEVSNEDNS LHFILYNKTN IIIPGNCTFE FSSQISEVFS IKMGPHEIGI 300
  301 KGQKELWFFP SLPTPLSNYT MKVVNQDGET ILVGKCADSN EITLKSPLAS FSTGSFQTGS 360
  361 FHTLQDPTNV FRADALSSPD ESSIMSTPFL GETDEVYNSG STLSRPFTWE EI

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [241-412]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLTTPNDPLL HVEVSNEDNS LHFILYNKTN IIIPGNCTFE FSSQISEVFS IKMGPHEIGI  60
   61 KGQKELWFFP SLPTPLSNYT MKVVNQDGET ILVGKCADSN EITLKSPLAS FSTGSFQTGS 120
  121 FHTLQDPTNV FRADALSSPD ESSIMSTPFL GETDEVYNSG STLSRPFTWE EI