YRC Public Data Repository - Protein Structure Prediction

Protein:	SLEB_OCEIH
Organism:	Oceanobacillus iheyensis HTE831
Length:	276 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLEB_OCEIH.

Description	E-value	Query Range	Subject Range
gi\|47554283, gi\|... - gi\|47569014\|ref\|ZP_00239704.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9241], gi\|4755...	226.0	[0..1]	[276..1]
SLEB_BACCR - Spore cortex-lytic enzyme OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / N... SLEB_BACCE - Spore cortex-lytic enzyme OS=Bacillus cereus GN=sleB PE=1 SV=1 gi\|228921423, gi... - gi\|228921423\|ref\|ZP_04084746.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar huazhongen... gi\|228819802, gi... - gi\|228939871\|ref\|ZP_04102448.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar berliner A... gi\|228985846, gi... - gi\|228985846\|ref\|ZP_04145995.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar tochigiens... gi\|229070227, gi... - gi\|229070227\|ref\|ZP_04203479.1\| Spore cortex-lytic enzyme [Bacillus cereus F65185], gi\|228712890\|gb\|... gi\|228786976, gi... - gi\|228972761\|ref\|ZP_04133360.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar thuringien... gi\|228979345, gi... - gi\|228979345\|ref\|ZP_04139681.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis Bt407], gi\|2287803... gi\|229116269, gi... - gi\|229116269\|ref\|ZP_04245659.1\| Spore cortex-lytic enzyme [Bacillus cereus Rock1-3], gi\|228667101\|gb... gi\|228655367, gi... - gi\|229128092\|ref\|ZP_04257074.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-Cer4], gi\|228655367\|... gi\|218161962, gi... - gi\|218234005\|ref\|YP_002367468.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus B4264], gi\|21... gi\|228703319, gi... - gi\|229079940\|ref\|ZP_04212471.1\| Spore cortex-lytic enzyme [Bacillus cereus Rock4-2], gi\|228703319\|gb... gi\|229103362, gi... - gi\|229103362\|ref\|ZP_04234044.1\| Spore cortex-lytic enzyme [Bacillus cereus Rock3-28], gi\|228679858\|g... gi\|229179035, gi... - gi\|229179035\|ref\|ZP_04306392.1\| Spore cortex-lytic enzyme [Bacillus cereus 172560W], gi\|228604403\|gb... gi\|228592637, gi... - gi\|229190847\|ref\|ZP_04317839.1\| Spore cortex-lytic enzyme [Bacillus cereus ATCC 10876], gi\|228592637... gi\|228638167, gi... - gi\|229145328\|ref\|ZP_04273717.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST24], gi\|228638167\|... gi\|228627205, gi... - gi\|229156330\|ref\|ZP_04284426.1\| Spore cortex-lytic enzyme [Bacillus cereus ATCC 4342], gi\|228627205\|...	226.0	[0..1]	[276..1]
gi\|52142756, gi\|... - gi\|52142756\|ref\|YP_084072.1\| spore cortex-lytic enzyme [Bacillus cereus E33L], gi\|51976225\|gb\|AAU177...	226.0	[0..1]	[276..1]
gi\|228649678, gi... - gi\|229133643\|ref\|ZP_04262469.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST196], gi\|228649678... gi\|163940501, gi... - gi\|89209416\|ref\|ZP_01187838.1\| Peptidoglycan-binding domain 1:Cell wall hydrolase, SleB [Bacillus we... gi\|229012007, gi... - gi\|229012007\|ref\|ZP_04169186.1\| Spore cortex-lytic enzyme [Bacillus mycoides DSM 2048], gi\|228749095...	225.0	[0..1]	[276..1]
gi\|227002927, gi... - gi\|227814439\|ref\|YP_002814448.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. CDC 6... gi\|228915357, gi... - gi\|228915357\|ref\|ZP_04078950.1\| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar pulsiensis... gi\|229265923, gi... - gi\|229601515\|ref\|YP_002867030.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A0248... gi\|254685313 - gi\|254685313\|ref\|ZP_05149173.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. CNEVA-... gi\|254722722 - gi\|254722722\|ref\|ZP_05184510.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A1055] gi\|254737769 - gi\|254737769\|ref\|ZP_05195472.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Wester... gi\|254743057 - gi\|254743057\|ref\|ZP_05200742.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Kruger... gi\|254752083 - gi\|254752083\|ref\|ZP_05204120.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Vollum... gi\|164715150, gi... - gi\|165868424\|ref\|ZP_02213084.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A0488]... gi\|254760604 - gi\|254760604\|ref\|ZP_05212628.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Austra... gi\|167532043, gi... - gi\|167631745\|ref\|ZP_02390072.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A0442]... gi\|167637623, gi... - gi\|167637623\|ref\|ZP_02395902.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A0193]... gi\|170670800, gi... - gi\|170685440\|ref\|ZP_02876664.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A0465]... gi\|170130543, gi... - gi\|170704742\|ref\|ZP_02895208.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A0389]... gi\|177649478, gi... - gi\|177649478\|ref\|ZP_02932480.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. A0174]... gi\|190563261, gi... - gi\|190565234\|ref\|ZP_03018154.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis Tsiankovski... gi\|49330712, gi\|... - gi\|49479156\|ref\|YP_036844.1\| spore cortex-lytic enzyme [Bacillus thuringiensis serovar konkukian str... gi\|49179496, gi\|... - gi\|49185569\|ref\|YP_028821.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Sterne], ... gi\|47528039, gi\|... - gi\|47528039\|ref\|YP_019388.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. 'Ames Anc... gi\|30257353, gi\|... - gi\|30262721\|ref\|NP_845098.1\| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Ames], gi... gi\|65320051, gi\|... - gi\|65320051\|ref\|ZP_00393010.1\| COG3773: Cell wall hydrolyses involved in spore germination [Bacillus...	225.0	[0..1]	[276..1]
gi\|222096255, gi... - gi\|222096255\|ref\|YP_002530312.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus Q1], gi\|22124... gi\|217063319, gi... - gi\|217960192\|ref\|YP_002338752.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH187], gi\|21... gi\|229139388, gi... - gi\|229139388\|ref\|ZP_04267959.1\| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST26], gi\|228643935\|... gi\|206973778, gi... - gi\|206973778\|ref\|ZP_03234696.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus H3081.97], gi\|... gi\|42737762, gi\|... - gi\|42781838\|ref\|NP_979085.1\| spore cortex-lytic enzyme prepeptide [Bacillus cereus ATCC 10987], gi\|4...	224.0	[0..1]	[276..1]
gi\|56380608, gi\|... - gi\|56420766\|ref\|YP_148084.1\| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex-l...	223.0	[0..4]	[276..3]
gi\|89099115, gi\|... - gi\|89099115\|ref\|ZP_01171994.1\| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore cortex...	221.0	[0..1]	[276..1]
gi\|56963635, gi\|... - gi\|56963635\|ref\|YP_175366.1\| spore cortex-lytic enzyme [Bacillus clausii KSM-K16], gi\|56909878\|dbj\|B...	213.0	[0..1]	[275..1]
SLEB_BACSU - Spore cortex-lytic enzyme OS=Bacillus subtilis (strain 168) GN=sleB PE=1 SV=1 gi\|221323732 - gi\|221323732\|ref\|ZP_03605026.1\| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str. SM... gi\|221319456 - gi\|221319456\|ref\|ZP_03600750.1\| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str. JH... gi\|221314534 - gi\|221314534\|ref\|ZP_03596339.1\| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str. NC... SLEB_BACSU - Spore cortex-lytic enzyme OS=Bacillus subtilis GN=sleB PE=1 SV=1	213.0	[0..3]	[276..2]

Back

Predicted Domain #1

Region A:
Residues: [1-108]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQSYKAFMI ILVVCSSLTM YFTQTDNTKT YAFSDQVIQQ GAVGEDVIEL QARLQYLGFY  60
   61 NGKIDGVFGW GTYWALRNFQ YEFGMEIDGL AGQTTKDKLV QASNYDKE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	10.09691
Match:	1lbuA
Description:	HYDROLASE METALLO (ZN) DD-PEPTIDASE
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [109-276]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YVTEQINKGN QFTHYGGGDR NTDGQSNSGG GSGNSGEDTG GTPSVNVPQG YSQNDIQLMA  60
   61 NAVYGEARGE PYEGQVAVAA VILNRLNSAL FPDTVSGVIF EPRAFTAVAD GQIWLEPNDK 120
  121 AREAVLDAIN GWDPSGNALY YFNPDTATSG WIWTRPQIKQ IGKHIFCK

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.962
Match:	2r1fA
Description:	No description for 2r1fA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits