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View Structure Prediction Details

Protein: gi|23099229, gi|...
Organism: Oceanobacillus iheyensis HTE831
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23099229, gi|....

Description E-value Query
Range
Subject
Range
gi|12407276 - gi|12407276|dbj|BAB21409.1| cytochrome b [Ophieleotris sp.]
158.0 [0..2] [197..187]
gi|62959652 - gi|62959652|gb|AAY23784.1| cytochrome b [Sicyopterus lagocephalus]
158.0 [0..2] [196..11]
gi|62959682, gi|... - gi|62959682|gb|AAY23799.1| cytochrome b [Sicyopterus sp. 1 PB-2005], gi|62959680|gb|AAY23798.1| cyto...
gi|62959678 - gi|62959678|gb|AAY23797.1| cytochrome b [Sicyopterus franouxi]
157.0 [0..3] [196..12]
gi|62959684, gi|... - gi|62959686|gb|AAY23801.1| cytochrome b [Sicyopterus marquesensis], gi|62959684|gb|AAY23800.1| cytoc...
157.0 [0..2] [196..11]
gi|12407294 - gi|12407294|dbj|BAB21418.1| cytochrome b [Taenioides limicola]
156.0 [0..2] [196..187]
gi|12407272 - gi|12407272|dbj|BAB21407.1| cytochrome b [Mogurnda mogurnda]
156.0 [0..2] [197..187]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKGKGMKFV GDSRISAERK PNVPKDYSEY PGRTEAFWPN FLLKEWLAGA VFLVGFLCLT  60
   61 LAHPSPLEGV ADPTDAAYIP LPDWYFLFLY ELLKYEFASG DWTLMGILVL PGIAFGALLL 120
  121 APFLDTGPGR RPRQRPIAVG MMLVGLASVI WLTYTSAAVV DWEGRAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.30103
Match: 1bccC
Description: Mitochondrial cytochrome b subunit, C-terminal domain; Mitochondrial cytochrome b subunit, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [168-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANKPVPESEV SIDTEHPGYA AYENSCLSCH GGELEGGAGP TLVGIDYSKE EIMTIATDGI  60
   61 GSMPADQFQG SEEELEQLAE FIISVNEETE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 1kv9A
Description: Quinoprotein alcohol dehydrogenase, C-terminal domain; Quinoprotein alcohol dehydrogenase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
electron carrier activity 1.19571234426478 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle