YRC Public Data Repository - Protein Structure Prediction

Protein:	CYSC_OCEIH
Organism:	Oceanobacillus iheyensis HTE831
Length:	199 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYSC_OCEIH.

Description	E-value	Query Range	Subject Range
gi\|110284175, gi... - gi\|69280172\|ref\|ZP_00614844.1\| Adenylylsulfate kinase [Mesorhizobium sp. BNC1], gi\|68189596\|gb\|EAN04...	197.0	[0..1]	[198..442]
gi\|56962388, gi\|... - gi\|56962388\|ref\|YP_174114.1\| adenylylsulfate kinase [Bacillus clausii KSM-K16], gi\|56908626\|dbj\|BAD6...	196.0	[0..5]	[199..6]
CYSC_MARHV - Adenylyl-sulfate kinase OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)...	194.0	[0..4]	[199..1]
gi\|106760900, gi... - gi\|119944563\|ref\|YP_942243.1\| adenylyl-sulfate kinase [Psychromonas ingrahamii 37], gi\|119863167\|gb\|...	193.0	[0..3]	[199..14]
gi\|48850516, gi\|... - gi\|87201265\|ref\|YP_498522.1\| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kina...	191.0	[0..1]	[193..445]
gi\|69152246, gi\|... - gi\|69936309\|ref\|ZP_00631135.1\| Adenylylsulfate kinase:Small GTP-binding protein domain [Paracoccus d...	191.0	[0..1]	[193..443]
gi\|45518946, gi\|... - gi\|73541220\|ref\|YP_295740.1\| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kina...	190.0	[0..1]	[198..443]
gi\|114227886, gi... - gi\|78701063\|ref\|ZP_00865516.1\| Adenylylsulfate kinase:Sulfate adenylyltransferase, large subunit [Al...	190.0	[0..2]	[199..440]
gi\|78185667, gi\|... - gi\|78185667\|ref\|YP_378101.1\| adenylylsulfate kinase [Synechococcus sp. CC9902], gi\|78169961\|gb\|ABB27...	190.0	[0..2]	[199..14]
gi\|50746429 - gi\|50746429\|ref\|XP_420493.1\| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate ...	189.0	[0..1]	[199..395]

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Predicted Domain #1

Region A:
Residues: [1-199]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKSTNIVWQ KTSVKKADRQ HLNNHKSAVL WFTGLSGSGK STLSSALEKE LFSLETHTYH  60
   61 LDGDNVRHGL NKNLGFSPED REENIRRIGE VSKLMVDAGL ITLTAFISPY QEDRDHVRAT 120
  121 LAQDEFIEIY VKCSLDMCEA RDPKGLYKKA RLGEINNFTG IDAPYEEPLH PEIVIDTENQ 180
  181 SIEESVQTII HYLKDKQYI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	47.09691
Match:	1x6vB
Description:	The crystal structure of human 3'-phosphoadenosine-5'-phosphosulfate synthetase 1
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits