YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|23099077, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	192 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23099077, gi|....

Description	E-value	Query Range	Subject Range
gi\|152024899, gi... - gi\|89203683\|ref\|ZP_01182292.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [B...	153.0	[0..1]	[192..1]
gi\|51975174, gi\|... - gi\|52141705\|ref\|YP_085123.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac...	153.0	[0..1]	[192..1]
gi\|56379670, gi\|... - gi\|56419828\|ref\|YP_147146.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pho...	153.0	[0..1]	[192..1]
gi\|221241286, gi... - gi\|222097228\|ref\|YP_002531285.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|49478371, gi\|... - gi\|49478371\|ref\|YP_037843.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac... gi\|42782866, gi\|... - gi\|42782866\|ref\|NP_980113.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac...	153.0	[0..1]	[192..1]
gi\|29897429, gi\|... - gi\|30021873\|ref\|NP_833504.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac... gi\|228980335, gi... - gi\|228980335\|ref\|ZP_04140646.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|218232647, gi... - gi\|218232647\|ref\|YP_002368584.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|218543080, gi... - gi\|218898881\|ref\|YP_002447292.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ...	153.0	[0..1]	[192..1]
gi\|195993203, gi... - gi\|196034129\|ref\|ZP_03101539.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|196024710, gi... - gi\|196044675\|ref\|ZP_03111910.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|177652024, gi... - gi\|177652024\|ref\|ZP_02934570.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|190568446, gi... - gi\|190568446\|ref\|ZP_03021353.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|170687905, gi... - gi\|170687905\|ref\|ZP_02879119.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|170128208, gi... - gi\|170706790\|ref\|ZP_02897248.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|167528812, gi... - gi\|167635855\|ref\|ZP_02394164.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|167512185, gi... - gi\|167639784\|ref\|ZP_02398053.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|228843223, gi... - gi\|228916420\|ref\|ZP_04079987.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|227002565, gi... - gi\|227813310\|ref\|YP_002813319.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|225865762, gi... - gi\|225865762\|ref\|YP_002751140.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|254683509 - gi\|254683509\|ref\|ZP_05147369.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|229604806, gi... - gi\|229604806\|ref\|YP_002868024.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|228597439, gi... - gi\|229186020\|ref\|ZP_04313190.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|229092821, gi... - gi\|229092821\|ref\|ZP_04223958.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|254755975 - gi\|254755975\|ref\|ZP_05208006.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|254739652 - gi\|254739652\|ref\|ZP_05197346.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|254735822 - gi\|254735822\|ref\|ZP_05193528.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|254722030 - gi\|254722030\|ref\|ZP_05183819.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|218904910, gi... - gi\|218904910\|ref\|YP_002452744.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ... gi\|254759366 - gi\|254759366\|ref\|ZP_05211391.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [... gi\|49186631, gi\|... - gi\|49186631\|ref\|YP_029883.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac... gi\|47504357, gi\|... - gi\|47529209\|ref\|YP_020558.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac... gi\|30258431, gi\|... - gi\|30263787\|ref\|NP_846164.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Bac... gi\|118418227, gi... - gi\|118479002\|ref\|YP_896153.1\| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [Ba...	152.0	[0..1]	[192..1]
PGSA_BACSU - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Bacillus subtilis GN=pgsA PE=3... gi\|16078755, gi\|... - gi\|2634064\|emb\|CAB13565.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subtilis ...	151.0	[0..2]	[191..3]
gi\|52785674, gi\|... - gi\|52785674\|ref\|YP_091503.1\| hypothetical protein BLi01916 [Bacillus licheniformis ATCC 14580], gi\|5...	151.0	[0..2]	[191..3]
gi\|221313891 - gi\|221313891\|ref\|ZP_03595696.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subt... PGSA_BACSU - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Bacillus subtilis (strain 168)... gi\|221323086 - gi\|221323086\|ref\|ZP_03604380.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subt... gi\|221318814 - gi\|221318814\|ref\|ZP_03600108.1\| phosphatidylglycerophosphate synthase [Bacillus subtilis subsp. subt... PGSA_BACSU - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Bacillus subtilis GN=pgsA PE=3...	151.0	[0..2]	[191..3]
gi\|25288723 - pir\|\|B83948 phosphatidylglycerophosphate synthase pgsA [imported] - Bacillus halodurans (strain C-12... gi\|10175006, gi\|... - gi\|15614949\|ref\|NP_243252.1\| phosphatidylglycerophosphate synthase [Bacillus halodurans C-125], gi\|1...	147.0	[0..1]	[192..1]

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Predicted Domain #1

Region A:
Residues: [1-192]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLPNKLTFS RILMIPIFIL LLSIPFPWGA WDIGNSELPV AHFLAALIFI IAAATDWVDG  60
   61 YYARKYQLVT NLGKFMDPLA DKLLVSAALI LLVEMEIAPA WIVIIIISRE LAVTGLRLVA 120
  121 AGEGIVLAAG SMGKLKTATQ MISIAVLLLH NFPFSYIDFP FGIIMLYIAL IFTIISGVDY 180
  181 FIKNWHVMRD SK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	31.481486
Match:	PF01066.12
Description:	No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits