YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|22777154, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	271 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22777154, gi|....

Description	E-value	Query Range	Subject Range
DIVIB_LISMO - Cell division protein DivIB OS=Listeria monocytogenes GN=divIB PE=3 SV=1 gi\|153191558, gi... - gi\|254912593\|ref\|ZP_05262605.1\| hypothetical protein LmonJ2_07331 [Listeria monocytogenes J2818], gi... gi\|47097646, gi\|... - gi\|47097646\|ref\|ZP_00235165.1\| cell division protein FtsQ [Listeria monocytogenes str. 1/2a F6854], ... gi\|133729714, gi... - gi\|254827078\|ref\|ZP_05231765.1\| hypothetical protein LmonocytogeFSL_01360 [Listeria monocytogenes FS... gi\|254936919 - gi\|254936919\|ref\|ZP_05268616.1\| hypothetical protein LmonF6_07326 [Listeria monocytogenes F6900] gi\|255028186 - gi\|255028186\|ref\|ZP_05300137.1\| hypothetical protein LmonL_01144 [Listeria monocytogenes LO28] gi\|224501165 - gi\|224501165\|ref\|ZP_03669472.1\| hypothetical protein LmonFR_01370 [Listeria monocytogenes FSL R2-561... DIVIB_LISMO - Cell division protein DivIB OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=... gi\|254899268, gi... - gi\|254899268\|ref\|ZP_05259192.1\| hypothetical protein LmonJ_05629 [Listeria monocytogenes J0161], gi\|... gi\|153196542, gi... - gi\|254831724\|ref\|ZP_05236379.1\| hypothetical protein Lmon1_10233 [Listeria monocytogenes 10403S], gi...	205.0	[0..3]	[269..4]
gi\|16801206 - gi\|16801206\|ref\|NP_471474.1\| hypothetical protein lin2140 [Listeria innocua Clip11262] gi\|25355693, gi\|... - pir\|\|AB1700 cell-division initiation protein divIB homolog divIB [imported] - Listeria innocua (stra...	196.0	[0..3]	[249..4]
gi\|133734834, gi... - gi\|254933462\|ref\|ZP_05266821.1\| cell division protein FtsQ [Listeria monocytogenes HPB2262], gi\|1532... gi\|255522105 - gi\|255522105\|ref\|ZP_05389342.1\| cell division protein FtsQ [Listeria monocytogenes FSL J1-175] gi\|254826210 - gi\|254826210\|ref\|ZP_05231211.1\| cell division protein FtsQ [Listeria monocytogenes FSL J1-194] gi\|46908270, gi\|... - gi\|46908270\|ref\|YP_014659.1\| cell division protein FtsQ [Listeria monocytogenes str. 4b F2365], gi\|4...	193.0	[0..3]	[249..4]
gi\|409708 - gi\|409708\|gb\|AAA72409.1\| divIB [Bacillus subtilis] gi\|409708\|gb\|AAA... - divIB	192.0	[0..4]	[257..8]
DIVB_BACSU, DIVI... - Cell division protein DivIB OS=Bacillus subtilis GN=divIB PE=1 SV=1, (P16655) Division initiation pr... DIVIB_BACSU - Cell division protein DivIB OS=Bacillus subtilis (strain 168) GN=divIB PE=1 SV=1 gi\|221313723 - gi\|221313723\|ref\|ZP_03595528.1\| cell-division initiation protein [Bacillus subtilis subsp. subtilis ... gi\|221318647 - gi\|221318647\|ref\|ZP_03599941.1\| cell-division initiation protein [Bacillus subtilis subsp. subtilis ... gi\|221322920 - gi\|221322920\|ref\|ZP_03604214.1\| cell-division initiation protein [Bacillus subtilis subsp. subtilis ...	192.0	[0..4]	[257..8]
gi\|2126795, gi\|4... - gi\|406877\|gb\|AAA57243.1\| DivIB protein, pir\|\|I40221 divIB protein - Bacillus licheniformis	186.0	[0..4]	[257..8]
gi\|52080126, gi\|... - gi\|52785500\|ref\|YP_091329.1\| DivIB [Bacillus licheniformis ATCC 14580], gi\|52348002\|gb\|AAU40636.1\| D...	186.0	[0..4]	[257..8]
gi\|69244712, gi\|... - gi\|69244712\|ref\|ZP_00602976.1\| Cell division protein FtsQ [Enterococcus faecium DO], gi\|68196303\|gb\|...	184.0	[0..8]	[271..93]
DIVIB_STAAR - Cell division protein DivIB OS=Staphylococcus aureus (strain MRSA252) GN=divIB PE=3 SV=1	178.0	[0..4]	[271..148]
gi\|82656322, gi\|... - gi\|82750791\|ref\|YP_416532.1\| cell division protein [Staphylococcus aureus RF122], gi\|82656322\|emb\|CA...	178.0	[0..4]	[271..147]

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Predicted Domain #1

Region A:
Residues: [1-271]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDKNVVSIE DRIPKLKHAR KKKANRRLIF YLSIFFLLIA VVVYLQSPLS HIRTIEVNGN  60
   61 TFLNEEKIIK YSELTTDTNI WTINTNSVEQ AIAKDPVIKN IQVDRKFPST VTLEVEEQPV 120
  121 IGYINDDSNY LPILGNGEIL DDSNQGFTGN APFLQGFDEE QLKQLATEMK DVPQSIMSLI 180
  181 SEIHWVESED DSNKIMLYMN DGYTVIGSLR EISNKISVYP SIVSQLEPED EGVIHIGVGV 240
  241 YFESYQDDQD VTELEVDETS GNDSEDGSEE D

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.045757
Match:	2qczA
Description:	No description for 2qczA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits