YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|23098374, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	239 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23098374, gi|....

Description	E-value	Query Range	Subject Range
gi\|221322366 - gi\|221322366\|ref\|ZP_03603660.1\| hypothetical protein BsubsS_05582 [Bacillus subtilis subsp. subtilis... ECSC_BACSU - Protein ecsC OS=Bacillus subtilis GN=ecsC PE=4 SV=1 gi\|221318091 - gi\|221318091\|ref\|ZP_03599385.1\| hypothetical protein BsubsJ_05476 [Bacillus subtilis subsp. subtilis... ECSC_BACSU - Protein EcsC OS=Bacillus subtilis (strain 168) GN=ecsC PE=4 SV=1 gi\|221313168 - gi\|221313168\|ref\|ZP_03594973.1\| hypothetical protein BsubsN3_05527 [Bacillus subtilis subsp. subtili...	265.0	[0..2]	[234..1]
gi\|47555729, gi\|... - gi\|47567534\|ref\|ZP_00238245.1\| protein ecsC [Bacillus cereus G9241], gi\|47555729\|gb\|EAL14069.1\| prot...	256.0	[0..1]	[235..1]
gi\|42736148, gi\|... - gi\|42780229\|ref\|NP_977476.1\| EcsC protein [Bacillus cereus ATCC 10987], gi\|42736148\|gb\|AAS40084.1\| E...	254.0	[0..1]	[235..1]
gi\|229154731, gi... - gi\|229154731\|ref\|ZP_04282846.1\| hypothetical protein bcere0010_9260 [Bacillus cereus ATCC 4342], gi\|... gi\|52144267, gi\|... - gi\|52144267\|ref\|YP_082561.1\| EcsC-like protein [Bacillus cereus E33L], gi\|51977736\|gb\|AAU19286.1\| Ec... gi\|228775523, gi... - gi\|228984236\|ref\|ZP_04144418.1\| hypothetical protein bthur0001_9440 [Bacillus thuringiensis serovar ...	254.0	[0..1]	[235..1]
gi\|229126461, gi... - gi\|229126461\|ref\|ZP_04255476.1\| hypothetical protein bcere0015_9180 [Bacillus cereus BDRD-Cer4], gi\|... gi\|229108617, gi... - gi\|229108617\|ref\|ZP_04238229.1\| hypothetical protein bcere0018_8990 [Bacillus cereus Rock1-15], gi\|2... gi\|228726446, gi... - gi\|229042899\|ref\|ZP_04190633.1\| hypothetical protein bcere0027_9570 [Bacillus cereus AH676], gi\|2287... gi\|228957430, gi... - gi\|228957430\|ref\|ZP_04119185.1\| hypothetical protein bthur0005_9500 [Bacillus thuringiensis serovar ... gi\|229177582, gi... - gi\|229177582\|ref\|ZP_04304960.1\| hypothetical protein bcere0005_9490 [Bacillus cereus 172560W], gi\|22... gi\|229149363, gi... - gi\|229149363\|ref\|ZP_04277599.1\| hypothetical protein bcere0011_9250 [Bacillus cereus m1550], gi\|2286... gi\|228919884, gi... - gi\|228919884\|ref\|ZP_04083240.1\| hypothetical protein bthur0011_9040 [Bacillus thuringiensis serovar ... gi\|29894750, gi\|... - gi\|30019207\|ref\|NP_830838.1\| protein ecsC [Bacillus cereus ATCC 14579], gi\|29894750\|gb\|AAP08039.1\| P... gi\|218234408, gi... - gi\|218234408\|ref\|YP_002365819.1\| EcsC protein [Bacillus cereus B4264], gi\|218162365\|gb\|ACK62357.1\| E...	254.0	[0..1]	[235..1]
gi\|21398982, gi\|... - gi\|65318439\|ref\|ZP_00391398.1\| hypothetical protein Bant_01001687 [Bacillus anthracis str. A2012], r... gi\|227006909, gi... - gi\|227816097\|ref\|YP_002816106.1\| EcsC protein [Bacillus anthracis str. CDC 684], gi\|227006909\|gb\|ACP... gi\|228944779, gi... - gi\|228944779\|ref\|ZP_04107142.1\| hypothetical protein bthur0007_9460 [Bacillus thuringiensis serovar ... gi\|229183359, gi... - gi\|229183359\|ref\|ZP_04310587.1\| hypothetical protein bcere0004_9340 [Bacillus cereus BGSC 6E1], gi\|2... gi\|229195356, gi... - gi\|229195356\|ref\|ZP_04322127.1\| hypothetical protein bcere0001_9270 [Bacillus cereus m1293], gi\|2285... gi\|229265628, gi... - gi\|229601220\|ref\|YP_002865601.1\| EcsC protein [Bacillus anthracis str. A0248], gi\|229265628\|gb\|ACQ47... gi\|254682771 - gi\|254682771\|ref\|ZP_05146632.1\| EcsC protein [Bacillus anthracis str. CNEVA-9066] gi\|254725560 - gi\|254725560\|ref\|ZP_05187342.1\| EcsC protein [Bacillus anthracis str. A1055] gi\|254734187 - gi\|254734187\|ref\|ZP_05191900.1\| EcsC protein [Bacillus anthracis str. Western North America USA6153] gi\|254740168 - gi\|254740168\|ref\|ZP_05197860.1\| EcsC protein [Bacillus anthracis str. Kruger B] gi\|170707708, gi... - gi\|170707708\|ref\|ZP_02898160.1\| EcsC protein [Bacillus anthracis str. A0389], gi\|170127483\|gb\|EDS963... gi\|254753508 - gi\|254753508\|ref\|ZP_05205544.1\| EcsC protein [Bacillus anthracis str. Vollum] gi\|170688121, gi... - gi\|170688121\|ref\|ZP_02879333.1\| EcsC protein [Bacillus anthracis str. A0465], gi\|170668016\|gb\|EDT187... gi\|254758606 - gi\|254758606\|ref\|ZP_05210633.1\| EcsC protein [Bacillus anthracis str. Australia 94] gi\|190566547, gi... - gi\|190566547\|ref\|ZP_03019464.1\| EcsC protein [Bacillus anthracis Tsiankovskii-I], gi\|190562099\|gb\|ED... gi\|177654158, gi... - gi\|177654158\|ref\|ZP_02936131.1\| EcsC protein [Bacillus anthracis str. A0174], gi\|172080865\|gb\|EDT659... gi\|196024956, gi... - gi\|196044317\|ref\|ZP_03111553.1\| EcsC protein [Bacillus cereus 03BB108], gi\|196024956\|gb\|EDX63627.1\| ... gi\|196036487, gi... - gi\|196036487\|ref\|ZP_03103883.1\| EcsC protein [Bacillus cereus W], gi\|195990961\|gb\|EDX54933.1\| EcsC p... gi\|49184002, gi\|... - gi\|49184002\|ref\|YP_027254.1\| EcsC protein [Bacillus anthracis str. Sterne], gi\|49177929\|gb\|AAT53305.... gi\|47501474, gi\|... - gi\|47526326\|ref\|YP_017675.1\| hypothetical protein GBAA1050 [Bacillus anthracis str. 'Ames Ancestor']... gi\|30261172, gi\|... - gi\|30261172\|ref\|NP_843549.1\| EcsC protein [Bacillus anthracis str. Ames], gi\|30254786\|gb\|AAP25035.1\|... gi\|165871869, gi... - gi\|165871869\|ref\|ZP_02216512.1\| EcsC protein [Bacillus anthracis str. A0488], gi\|164712446\|gb\|EDR179... gi\|167640267, gi... - gi\|167640267\|ref\|ZP_02398533.1\| EcsC protein [Bacillus anthracis str. A0193], gi\|167511868\|gb\|EDR872... gi\|167529213, gi... - gi\|167635385\|ref\|ZP_02393699.1\| EcsC protein [Bacillus anthracis str. A0442], gi\|167529213\|gb\|EDR919...	253.0	[0..1]	[235..1]
gi\|49332430, gi\|... - gi\|49480874\|ref\|YP_035309.1\| protein EcsC [Bacillus thuringiensis serovar konkukian str. 97-27], gi\|...	253.0	[0..1]	[235..1]
gi\|75758805, gi\|... - gi\|75758805\|ref\|ZP_00738919.1\| Protein ecsC [Bacillus thuringiensis serovar israelensis ATCC 35646],... gi\|228899731, gi... - gi\|228899731\|ref\|ZP_04063979.1\| hypothetical protein bthur0014_9460 [Bacillus thuringiensis IBL 4222... gi\|218541698, gi... - gi\|218896107\|ref\|YP_002444518.1\| EcsC protein [Bacillus cereus G9842], gi\|218541698\|gb\|ACK94092.1\| E...	251.0	[0..1]	[235..1]
gi\|25369945 - pir\|\|A83799 hypothetical protein BH1193 [imported] - Bacillus halodurans (strain C-125) gi\|15613756, gi\|... - gi\|15613756\|ref\|NP_242059.1\| hypothetical protein BH1193 [Bacillus halodurans C-125], gi\|10173809\|db...	251.0	[0..1]	[235..1]
gi\|89205601, gi\|... - gi\|89205601\|ref\|ZP_01184169.1\| EcsC protein [Bacillus weihenstephanensis KBAB4], gi\|89156395\|gb\|EAR7... gi\|228651543, gi... - gi\|229131952\|ref\|ZP_04260817.1\| hypothetical protein bcere0014_8950 [Bacillus cereus BDRD-ST196], gi...	250.0	[0..1]	[235..1]

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Predicted Domain #1

Region A:
Residues: [1-239]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAYEDIVSQ ELAQWRKKMY AKPSLFNQLS KKAQTKINNW IPEKIHSIIT DSIKNMVKAT  60
   61 LVGSHMTTRK PEVQELNLYQ QDQLVKEKLS TYRKTASAEG AGTGAGGILL GFADFPLLLS 120
  121 IKLKFLFEAA TIYGFNTKEY EERLFILHIF QLAFSNEKTR KQTLRIIENW EQEKQHLLDM 180
  181 DWRAFQQEYR DYIDLVKLFQ LVPGFGAIVG AYANYNLLDQ LGETAMNAYR LRILNIPKN

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits