YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|22776464, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	105 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22776464, gi|....

Description	E-value	Query Range	Subject Range
gi\|251810171, gi... - gi\|251810171\|ref\|ZP_04824644.1\| CHY zinc finger family protein [Staphylococcus epidermidis BCM-HMP00... gi\|57866347, gi\|... - gi\|57866347\|ref\|YP_187997.1\| hypothetical protein SERP0404 [Staphylococcus epidermidis RP62A], gi\|57... gi\|27314980, gi\|... - gi\|27467437\|ref\|NP_764074.1\| hypothetical protein SE0519 [Staphylococcus epidermidis ATCC 12228], gi...	114.0	[0..1]	[102..1]
gi\|68447879, gi\|... - gi\|70727153\|ref\|YP_254069.1\| hypothetical protein SH2154 [Staphylococcus haemolyticus JCSC1435], gi\|...	113.0	[0..1]	[102..2]
gi\|76573604 - gi\|76573604\|dbj\|BAE44688.1\| hypothetical protein [Candida albicans] gi\|46443308, gi\|... - gi\|77022694\|ref\|XP_888791.1\| hypothetical protein CaO19_6555 [Candida albicans SC5314], gi\|68469208\|...	112.0	[0..2]	[103..15]
gi\|15923727, gi\|... - gi\|15923727\|ref\|NP_371261.1\| hypothetical protein SAV0737 [Staphylococcus aureus subsp. aureus Mu50]... gi\|15926414, gi\|... - gi\|15926414\|ref\|NP_373947.1\| hypothetical protein SA0692 [Staphylococcus aureus subsp. aureus N315],... gi\|49482994, gi\|... - gi\|49482994\|ref\|YP_040218.1\| hypothetical protein SAR0791 [Staphylococcus aureus subsp. aureus MRSA2... gi\|49244052, gi\|... - gi\|49485609\|ref\|YP_042830.1\| hypothetical protein SAS0702 [Staphylococcus aureus subsp. aureus MSSA4... gi\|156721200, gi... - gi\|156979065\|ref\|YP_001441324.1\| hypothetical protein SAHV_0734 [Staphylococcus aureus subsp. aureus... gi\|25353254 - pir\|\|B89846 conserved hypothetical protein SA0692 [imported] - Staphylococcus aureus (strain N315) gi\|150373718, gi... - gi\|151220918\|ref\|YP_001331740.1\| hypothetical protein NWMN_0706 [Staphylococcus aureus subsp. aureus... gi\|21282428, gi\|... - gi\|21282428\|ref\|NP_645516.1\| hypothetical protein MW0699 [Staphylococcus aureus subsp. aureus MW2], ... gi\|221140824 - gi\|221140824\|ref\|ZP_03565317.1\| hypothetical protein SauraJ_04198 [Staphylococcus aureus subsp. aure... gi\|227246435, gi... - gi\|227557171\|ref\|ZP_03987218.1\| CHY zinc finger family protein [Staphylococcus aureus subsp. aureus ... gi\|227899263, gi... - gi\|227899263\|ref\|ZP_04017068.1\| CHY zinc finger family protein [Staphylococcus aureus subsp. aureus ... gi\|251802813, gi... - gi\|251813707\|ref\|ZP_04828180.1\| CHY zinc finger family protein [Staphylococcus aureus subsp. aureus ... gi\|253315830 - gi\|253315830\|ref\|ZP_04839043.1\| hypothetical protein SauraC_06725 [Staphylococcus aureus subsp. aure... gi\|253731365, gi... - gi\|253731365\|ref\|ZP_04865530.1\| CHY zinc finger family protein [Staphylococcus aureus subsp. aureus ... gi\|253732815, gi... - gi\|253732815\|ref\|ZP_04866980.1\| CHY zinc finger family protein [Staphylococcus aureus subsp. aureus ... gi\|255005528 - gi\|255005528\|ref\|ZP_05144129.2\| hypothetical protein SauraM_03635 [Staphylococcus aureus subsp. aure... gi\|90582497, gi\|... - gi\|90582497\|ref\|ZP_01238260.1\| CHY zinc finger [Staphylococcus aureus subsp. aureus JH1], gi\|9042828... gi\|57285761, gi\|... - gi\|57651575\|ref\|YP_185674.1\| hypothetical protein SACOL0800 [Staphylococcus aureus subsp. aureus COL... gi\|90585254, gi\|... - gi\|90585254\|ref\|ZP_01240964.1\| CHY zinc finger [Staphylococcus aureus subsp. aureus JH9], gi\|9043098... gi\|88194515, gi\|... - gi\|88194515\|ref\|YP_499310.1\| hypothetical protein SAOUHSC_00751 [Staphylococcus aureus subsp. aureus... gi\|82655972, gi\|... - gi\|82750441\|ref\|YP_416182.1\| hypothetical protein SAB0689c [Staphylococcus aureus RF122], gi\|8265597... gi\|221137636 - gi\|221137636\|ref\|ZP_03562442.1\| hypothetical protein SauraJK_03148 [Staphylococcus aureus subsp. aur...	112.0	[0..1]	[102..1]
gi\|72495803, gi\|... - gi\|73663288\|ref\|YP_302069.1\| hypothetical protein SSP1979 [Staphylococcus saprophyticus subsp. sapro...	111.0	[0..1]	[102..1]
gi\|165976003, gi... - gi\|165976003\|ref\|YP_001651596.1\| hypothetical protein APJL_0582 [Actinobacillus pleuropneumoniae ser... gi\|126096863, gi... - gi\|126208071\|ref\|YP_001053296.1\| hypothetical protein APL_0589 [Actinobacillus pleuropneumoniae L20]... gi\|190149903, gi... - gi\|190149903\|ref\|YP_001968428.1\| hypothetical protein APP7_0634 [Actinobacillus pleuropneumoniae ser... gi\|32034369 - gi\|32034369\|ref\|ZP_00134559.1\| COG4357: Uncharacterized conserved protein [Actinobacillus pleuropneu...	109.0	[0..1]	[102..1]
gi\|76802166, gi\|... - gi\|76802166\|ref\|YP_327174.1\| hypothetical protein NP3052A [Natronomonas pharaonis DSM 2160], gi\|7655...	106.0	[0..3]	[102..7]
HOT13_KLULA - Helper of Tim protein 13 OS=Kluyveromyces lactis GN=HOT13 PE=3 SV=1 HOT13_KLULA - Helper of Tim protein 13 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 126...	105.0	[0..3]	[102..5]
gi\|23494041, gi\|... - gi\|25028755\|ref\|NP_738809.1\| hypothetical protein CE2199 [Corynebacterium efficiens YS-314], gi\|2349...	104.0	[0..1]	[102..4]
YEMC_SCHPO - Uncharacterized protein C29B12.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29B1... SPAC29B12.12 - helper of TIM	104.0	[0..4]	[102..12]

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Predicted Domain #1

Region A:
Residues: [1-105]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVYGKVVD HQSRCEHYHS KKDIISIKFK CCNAYYPCYK CHQECEDHEI ERWPREEFDE  60
   61 KAILCGACQT ELTINEYLKM NSCKNCNASF NENCQYHYHL YFNYK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	13.0
Match:	2dktA
Description:	No description for 2dktA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits