YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|22775729, gi\|...
Organism:	Oceanobacillus iheyensis HTE831
Length:	291 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22775729, gi|....

Description	E-value	Query Range	Subject Range
gi\|47500443, gi\|... - gi\|47525295\|ref\|YP_016644.1\| yabG protein [Bacillus anthracis str. 'Ames Ancestor'], gi\|47500443\|gb\|... gi\|42779121, gi\|... - gi\|42779121\|ref\|NP_976368.1\| yabG protein [Bacillus cereus ATCC 10987], gi\|42735036\|gb\|AAS38976.1\| y... gi\|30260232, gi\|... - gi\|30260232\|ref\|NP_842609.1\| yabG protein [Bacillus anthracis str. Ames], gi\|30253553\|gb\|AAP24095.1\|... gi\|118475814, gi... - gi\|118475814\|ref\|YP_892965.1\| peptidase [Bacillus thuringiensis str. Al Hakam], gi\|118415039\|gb\|ABK8... gi\|65317502, gi\|... - gi\|65317502\|ref\|ZP_00390461.1\| hypothetical protein Bant_01000667 [Bacillus anthracis str. A2012], r... gi\|49480336, gi\|... - gi\|49480336\|ref\|YP_034396.1\| sporulation-specific protease [Bacillus thuringiensis serovar konkukian... gi\|49183076, gi\|... - gi\|49183076\|ref\|YP_026328.1\| yabG protein [Bacillus anthracis str. Sterne], gi\|49177003\|gb\|AAT52379.... gi\|254762415 - gi\|254762415\|ref\|ZP_05214257.1\| yabG protein [Bacillus anthracis str. Australia 94] gi\|254756359 - gi\|254756359\|ref\|ZP_05208388.1\| yabG protein [Bacillus anthracis str. Vollum] gi\|254744654 - gi\|254744654\|ref\|ZP_05202333.1\| yabG protein [Bacillus anthracis str. Kruger B] gi\|254733578 - gi\|254733578\|ref\|ZP_05191299.1\| yabG protein [Bacillus anthracis str. Western North America USA6153] gi\|254724183 - gi\|254724183\|ref\|ZP_05185968.1\| yabG protein [Bacillus anthracis str. A1055] gi\|254682331 - gi\|254682331\|ref\|ZP_05146192.1\| yabG protein [Bacillus anthracis str. CNEVA-9066] gi\|229267185, gi... - gi\|229602777\|ref\|YP_002864693.1\| yabG protein [Bacillus anthracis str. A0248], gi\|229267185\|gb\|ACQ48... gi\|228589023, gi... - gi\|229194433\|ref\|ZP_04321237.1\| Sporulation-specific protease yabG [Bacillus cereus m1293], gi\|22858... gi\|229182437, gi... - gi\|229182437\|ref\|ZP_04309689.1\| Sporulation-specific protease yabG [Bacillus cereus BGSC 6E1], gi\|22... gi\|229170893, gi... - gi\|229170893\|ref\|ZP_04298496.1\| Sporulation-specific protease yabG [Bacillus cereus MM3], gi\|2286125... gi\|206977961, gi... - gi\|206977961\|ref\|ZP_03238848.1\| yabG protein [Bacillus cereus H3081.97], gi\|206743867\|gb\|EDZ55287.1\|... gi\|228646554, gi... - gi\|229136889\|ref\|ZP_04265517.1\| Sporulation-specific protease yabG [Bacillus cereus BDRD-ST26], gi\|2... gi\|217957618, gi... - gi\|217957618\|ref\|YP_002336160.1\| yabG protein [Bacillus cereus AH187], gi\|217066566\|gb\|ACJ80816.1\| y... gi\|228663730, gi... - gi\|229119705\|ref\|ZP_04248967.1\| Sporulation-specific protease yabG [Bacillus cereus 95/8201], gi\|228... gi\|218535904, gi... - gi\|218901243\|ref\|YP_002449077.1\| yabG protein [Bacillus cereus AH820], gi\|218535904\|gb\|ACK88302.1\| y... gi\|229089174, gi... - gi\|229089174\|ref\|ZP_04220456.1\| Sporulation-specific protease yabG [Bacillus cereus Rock3-42], gi\|22... gi\|221237859, gi... - gi\|222093812\|ref\|YP_002527861.1\| sporulation-specific protease YabG [Bacillus cereus Q1], gi\|2212378... gi\|228815806, gi... - gi\|228943849\|ref\|ZP_04106235.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar m... gi\|228931545, gi... - gi\|228931545\|ref\|ZP_04094452.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar a... gi\|228834343, gi... - gi\|228925296\|ref\|ZP_04088393.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar p... gi\|228912782, gi... - gi\|228912782\|ref\|ZP_04076430.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar p... gi\|227007332, gi... - gi\|227812715\|ref\|YP_002812724.1\| yabG protein [Bacillus anthracis str. CDC 684], gi\|227007332\|gb\|ACP... gi\|167529528, gi... - gi\|167635054\|ref\|ZP_02393371.1\| yabG protein [Bacillus anthracis str. A0442], gi\|167529528\|gb\|EDR922... gi\|225788251, gi... - gi\|225862094\|ref\|YP_002747472.1\| yabG protein [Bacillus cereus 03BB102], gi\|225788251\|gb\|ACO28468.1\|... gi\|167510533, gi... - gi\|167641548\|ref\|ZP_02399796.1\| yabG protein [Bacillus anthracis str. A0193], gi\|167510533\|gb\|EDR859... gi\|170667107, gi... - gi\|170688883\|ref\|ZP_02880085.1\| yabG protein [Bacillus anthracis str. A0465], gi\|170667107\|gb\|EDT178... gi\|170707530, gi... - gi\|170707530\|ref\|ZP_02897983.1\| yabG protein [Bacillus anthracis str. A0389], gi\|170127526\|gb\|EDS964... gi\|172080168, gi... - gi\|177655327\|ref\|ZP_02936856.1\| yabG protein [Bacillus anthracis str. A0174], gi\|172080168\|gb\|EDT652... gi\|190559893, gi... - gi\|190568969\|ref\|ZP_03021870.1\| yabG protein [Bacillus anthracis Tsiankovskii-I], gi\|190559893\|gb\|ED... gi\|196036386, gi... - gi\|196036386\|ref\|ZP_03103783.1\| yabG protein [Bacillus cereus W], gi\|195991016\|gb\|EDX54987.1\| yabG p... gi\|196047387, gi... - gi\|196047387\|ref\|ZP_03114600.1\| yabG protein [Bacillus cereus 03BB108], gi\|196021789\|gb\|EDX60483.1\| ...	477.0	[0..1]	[287..1]
gi\|25340321 - pir\|\|B83657 hypothetical protein BH0058 [imported] - Bacillus halodurans (strain C-125) gi\|15612621, gi\|... - gi\|15612621\|ref\|NP_240924.1\| hypothetical protein BH0058 [Bacillus halodurans C-125], gi\|10172670\|db...	477.0	[0..1]	[290..1]
gi\|229153821, gi... - gi\|229153821\|ref\|ZP_04281952.1\| Sporulation-specific protease yabG [Bacillus cereus ATCC 4342], gi\|2... gi\|228776412, gi... - gi\|228983298\|ref\|ZP_04143512.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar t... gi\|47553425, gi\|... - gi\|47569891\|ref\|ZP_00240558.1\| sporulation-specific protease YabG [Bacillus cereus G9241], gi\|475534...	476.0	[0..1]	[287..1]
gi\|52145173, gi\|... - gi\|52145173\|ref\|YP_081655.1\| sporulation-specific protease [Bacillus cereus E33L], gi\|51978642\|gb\|AA...	476.0	[0..1]	[287..1]
gi\|228853779, gi... - gi\|228905839\|ref\|ZP_04069737.1\| Sporulation-specific protease yabG [Bacillus thuringiensis IBL 200],... gi\|228898796, gi... - gi\|228898796\|ref\|ZP_04063079.1\| Sporulation-specific protease yabG [Bacillus thuringiensis IBL 4222]... gi\|228789466, gi... - gi\|228970231\|ref\|ZP_04130891.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar t... gi\|228822303, gi... - gi\|228937345\|ref\|ZP_04099992.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar b... gi\|228782897, gi... - gi\|228976801\|ref\|ZP_04137214.1\| Sporulation-specific protease yabG [Bacillus thuringiensis Bt407], g... gi\|75759604, gi\|... - gi\|75759604\|ref\|ZP_00739690.1\| Sporulation-specific protease YabG [Bacillus thuringiensis serovar is...	475.0	[0..1]	[287..1]
gi\|228705977, gi... - gi\|229077321\|ref\|ZP_04209998.1\| Sporulation-specific protease yabG [Bacillus cereus Rock4-2], gi\|228... gi\|228715291, gi... - gi\|229067807\|ref\|ZP_04201125.1\| Sporulation-specific protease yabG [Bacillus cereus F65185], gi\|2287... gi\|228956484, gi... - gi\|228956484\|ref\|ZP_04118281.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar p... gi\|228918993, gi... - gi\|228918993\|ref\|ZP_04082373.1\| Sporulation-specific protease yabG [Bacillus thuringiensis serovar h... gi\|228634994, gi... - gi\|229148452\|ref\|ZP_04276709.1\| Sporulation-specific protease yabG [Bacillus cereus m1550], gi\|22863... gi\|228640611, gi... - gi\|229142848\|ref\|ZP_04271291.1\| Sporulation-specific protease yabG [Bacillus cereus BDRD-ST24], gi\|2... gi\|229125560, gi... - gi\|229125560\|ref\|ZP_04254593.1\| Sporulation-specific protease yabG [Bacillus cereus BDRD-Cer4], gi\|2... gi\|229107729, gi... - gi\|229107729\|ref\|ZP_04237366.1\| Sporulation-specific protease yabG [Bacillus cereus Rock1-15], gi\|22... gi\|30018313, gi\|... - gi\|30018313\|ref\|NP_829944.1\| sporulation-specific protease YabG [Bacillus cereus ATCC 14579], gi\|298... gi\|229188328, gi... - gi\|229188328\|ref\|ZP_04315377.1\| Sporulation-specific protease yabG [Bacillus cereus ATCC 10876], gi\|... gi\|206972577, gi... - gi\|206972577\|ref\|ZP_03233520.1\| yabG protein [Bacillus cereus AH1134], gi\|206732479\|gb\|EDZ49658.1\| y... gi\|229176643, gi... - gi\|229176643\|ref\|ZP_04304048.1\| Sporulation-specific protease yabG [Bacillus cereus 172560W], gi\|228...	474.0	[0..1]	[287..1]
gi\|229165031, gi... - gi\|229165031\|ref\|ZP_04292827.1\| Sporulation-specific protease yabG [Bacillus cereus AH621], gi\|22861... gi\|229131050, gi... - gi\|229131050\|ref\|ZP_04259963.1\| Sporulation-specific protease yabG [Bacillus cereus BDRD-ST196], gi\|... gi\|89207205, gi\|... - gi\|89207205\|ref\|ZP_01185751.1\| Peptidase U57, YabG [Bacillus weihenstephanensis KBAB4], gi\|89154885\|... gi\|229009552, gi... - gi\|229009552\|ref\|ZP_04166779.1\| Sporulation-specific protease yabG [Bacillus mycoides DSM 2048], gi\|...	471.0	[0..1]	[287..1]
gi\|221317107 - gi\|221317107\|ref\|ZP_03598401.1\| hypothetical protein BsubsJ_00215 [Bacillus subtilis subsp. subtilis... YABG_BACSU - Sporulation-specific protease yabG OS=Bacillus subtilis GN=yabG PE=2 SV=1 gi\|221312174 - gi\|221312174\|ref\|ZP_03593979.1\| hypothetical protein BsubsN3_00215 [Bacillus subtilis subsp. subtili... gi\|221321370 - gi\|221321370\|ref\|ZP_03602664.1\| hypothetical protein BsubsS_00215 [Bacillus subtilis subsp. subtilis... YABG_BACSU - Sporulation-specific protease YabG OS=Bacillus subtilis (strain 168) GN=yabG PE=2 SV=1	462.0	[0..1]	[284..1]
gi\|152022642, gi... - gi\|89202238\|ref\|ZP_01180966.1\| Peptidase U57, YabG [Bacillus cereus subsp. cytotoxis NVH 391-98], gi...	455.0	[0..1]	[287..1]
gi\|56378413, gi\|... - gi\|56418571\|ref\|YP_145889.1\| hypothetical protein GK0036 [Geobacillus kaustophilus HTA426], gi\|56378...	437.0	[0..2]	[290..3]

Back

Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIANGELVT RKSYDHDLLF RVIEIKKDIA VLHGEDMRLA ADAPLNDLSK VDQREKKRRK  60
   61 EQEKEKQETS YRLFRQDYQL MKEKRNYEAT EGYSNAASYF QLPAKVLHMD GDANYLRKCI 120
  121 QLYQRIGLQV HGVHLTEVQM PEEINDLLER IQPDILVITG HDAYSKNKGL K

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [172-291]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDLRAYRHSK YFVETVREAR RVVPNLDQLI IFAGACQSHF ESIIRAGANF ASSPSRVNIH  60
   61 ALDPVYIVAK IAYTPFMESV SVWEALRNTL TGERGLGGIE TKGLLRTGMP FVEDSNEEEM 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits