YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|21673686, gi\|...
Organism:	Chlorobium tepidum TLS
Length:	98 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21673686, gi|....

Description	E-value	Query Range	Subject Range
gi\|68553314, gi\|... - gi\|68553314\|ref\|ZP_00592691.1\| DsrH like protein [Prosthecochloris aestuarii DSM 271], gi\|68239766\|g...	136.0	[0..1]	[98..1]
gi\|67935129, gi\|... - gi\|67935129\|ref\|ZP_00528153.1\| DsrH like protein [Chlorobium phaeobacteroides DSM 266], gi\|67776024\|...	127.0	[0..1]	[98..1]
gi\|68551099, gi\|... - gi\|68551099\|ref\|ZP_00590527.1\| DsrH like protein [Pelodictyon phaeoclathratiforme BU-1], gi\|68242041...	123.0	[0..1]	[98..1]
gi\|189346234, gi... - gi\|67919703\|ref\|ZP_00513270.1\| DsrH like protein [Chlorobium limicola DSM 245], gi\|67782671\|gb\|EAM42...	123.0	[0..1]	[98..1]
gi\|78172102, gi\|... - gi\|78189903\|ref\|YP_380241.1\| DsrH protein [Chlorobium chlorochromatii CaD3], gi\|78172102\|gb\|ABB29198...	120.0	[0..1]	[97..1]
gi\|71481781, gi\|... - gi\|71481781\|ref\|ZP_00661485.1\| DsrH like protein [Prosthecochloris vibrioformis DSM 265], gi\|7128343...	116.0	[0..1]	[98..1]
gi\|78165834, gi\|... - gi\|78185932\|ref\|YP_373975.1\| DsrH protein [Pelodictyon luteolum DSM 273], gi\|78165834\|gb\|ABB22932.1\|...	115.0	[0..1]	[98..1]
gi\|151567648, gi... - gi\|3228384\|gb\|AAC35398.1\| DsrH [Allochromatium vinosum], gi\|151567654\|pdb\|2HYB\|R Chain R, Crystal St... gi\|241776766, gi... - gi\|241776766\|ref\|ZP_04774042.1\| sulfur relay protein TusB/DsrH [Allochromatium vinosum DSM 180], gi\|...	115.0	[0..1]	[98..3]
gi\|49075528 - gi\|49075528\|gb\|AAT49479.1\| PA2607 [synthetic construct]	112.0	[0..2]	[98..5]
gi\|84326934, gi\|... - gi\|84326934\|ref\|ZP_00974958.1\| COG2168: Uncharacterized conserved protein involved in oxidation of i... gi\|11347913 - pir\|\|B83320 conserved hypothetical protein PA2607 [imported] - Pseudomonas aeruginosa (strain PAO1) gi\|115585815, gi... - gi\|46163732\|ref\|ZP_00204840.1\| COG2168: Uncharacterized conserved protein involved in oxidation of i... gi\|15597803, gi\|... - gi\|9948672\|gb\|AAG05995.1\|AE004689_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1], gi... gi\|218771457, gi... - gi\|218891232\|ref\|YP_002440098.1\| putative DsrH family protein [Pseudomonas aeruginosa LESB58], gi\|21...	111.0	[0..2]	[98..5]

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Predicted Domain #1

Region A:
Residues: [1-98]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHTINKSPF ENNTFTTCVR FLQPGDPVLF IEDGVYAVQA GNRFGALIQS VLKKNNPVYA  60
   61 LKPDLDARGI SAIAEGVKTV DYAGFVDLVE EHQVNSWL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.39794
Match:	2hy5C
Description:	No description for 2hy5C was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits