YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|21673684, gi\|...
Organism:	Chlorobium tepidum TLS
Length:	119 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21673684, gi|....

Description	E-value	Query Range	Subject Range
gi\|78700533, gi\|... - gi\|78700533\|ref\|ZP_00864989.1\| DsrE protein [Alkalilimnicola ehrlichei MLHE-1], gi\|78522020\|gb\|EAP35...	148.0	[0..1]	[119..1]
gi\|23013192 - gi\|23013192\|ref\|ZP_00053121.1\| COG1553: Uncharacterized conserved protein involved in intracellular ...	146.0	[0..1]	[119..1]
gi\|82947309, gi\|... - gi\|83312468\|ref\|YP_422732.1\| intracellular sulfur oxidation protein dsrE [Magnetospirillum magneticu...	146.0	[0..1]	[119..1]
gi\|88928617, gi\|... - gi\|88948727\|ref\|ZP_01151490.1\| DsrE protein [Halorhodospira halophila SL1], gi\|88928617\|gb\|EAR47578....	145.0	[0..1]	[119..1]
gi\|74057996, gi\|... - gi\|74318501\|ref\|YP_316241.1\| DsrE protein [Thiobacillus denitrificans ATCC 25259], gi\|74057996\|gb\|AA...	144.0	[0..1]	[119..1]
gi\|194332886, gi... - gi\|68553312\|ref\|ZP_00592689.1\| DsrE-like protein [Prosthecochloris aestuarii DSM 271], gi\|68239764\|g...	139.0	[0..1]	[119..1]
gi\|78189905, gi\|... - gi\|78189905\|ref\|YP_380243.1\| DsrE protein [Chlorobium chlorochromatii CaD3], gi\|78172104\|gb\|ABB29200...	134.0	[0..1]	[119..1]
gi\|71283436, gi\|... - gi\|71481783\|ref\|ZP_00661487.1\| DsrE-like protein [Prosthecochloris vibrioformis DSM 265], gi\|7128343...	133.0	[0..1]	[119..1]
gi\|67776026, gi\|... - gi\|67935131\|ref\|ZP_00528155.1\| DsrE-like protein [Chlorobium phaeobacteroides DSM 266], gi\|67776026\|...	132.0	[0..1]	[119..1]
gi\|189346232, gi... - gi\|67919701\|ref\|ZP_00513268.1\| DsrE-like protein [Chlorobium limicola DSM 245], gi\|67782669\|gb\|EAM42...	131.0	[0..1]	[119..1]

Back

Predicted Domain #1

Region A:
Residues: [1-119]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIGILLKEG PYNHQAADTA YKFAEAAIAK GHKVDAIFLY NDGVINATKL GDPPQDDRNI  60
   61 AARWTELNQK HGVEVLACIA ASKRRGINDD VMIDGAEITG LGTLTDIAIR NDRLLTFGD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.09691
Match:	2hy5A
Description:	No description for 2hy5A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits