YRC Public Data Repository - Protein Structure Prediction

Protein:	NADE_CHLTE
Organism:	Chlorobium tepidum TLS
Length:	277 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NADE_CHLTE.

Description	E-value	Query Range	Subject Range
NADE_GEOUR - NH(3)-dependent NAD(+) synthetase OS=Geobacter uraniireducens (strain Rf4) GN=nadE PE=3 SV=1	234.0	[0..4]	[273..2]
NAE2_THEMA, NADE... - (Q9X0Y0) Probable glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+) synthase [glutamine-hyd... NADE2_THEMA - Probable glutamine-dependent NAD(+) synthetase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DS...	232.0	[0..5]	[274..290]
gi\|53764373, gi\|... - gi\|75906642\|ref\|YP_320938.1\| NAD synthetase [Anabaena variabilis ATCC 29413], gi\|75700367\|gb\|ABA2004...	232.0	[0..1]	[277..269]
gi\|90022198, gi\|... - gi\|90022198\|ref\|YP_528025.1\| Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Saccharophagu...	231.0	[0..9]	[276..260]
gi\|25330095 - pir\|\|AF2116 NH(3)-dependent NAD(+) synthetase [imported] - Nostoc sp. (strain PCC 7120) gi\|17229977, gi\|... - gi\|17229977\|ref\|NP_486525.1\| NAD synthetase [Nostoc sp. PCC 7120], gi\|17131577\|dbj\|BAB74184.1\| NH(3)...	230.0	[0..1]	[277..269]
gi\|36786622, gi\|... - gi\|37527188\|ref\|NP_930532.1\| NAD synthetase [Photorhabdus luminescens subsp. laumondii TTO1], gi\|367...	229.0	[0..1]	[270..251]
gi\|120323657, gi... - gi\|77954098\|ref\|ZP_00818498.1\| NAD+ synthase [Marinobacter aquaeolei VT8], gi\|77866966\|gb\|EAO98249.1...	228.0	[0..2]	[277..266]
NADE_SYNY3 - Probable glutamine-dependent NAD(+) synthetase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=na... NADE_SYNY3 - Probable glutamine-dependent NAD(+) synthetase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / ... gi\|7451133 - pir\|\|S75927 hypothetical protein - Synechocystis sp. (strain PCC 6803)	228.0	[0..7]	[270..275]
gi\|39982522, gi\|... - gi\|39995758\|ref\|NP_951709.1\| NAD synthetase [Geobacter sulfurreducens PCA], gi\|39982522\|gb\|AAR33982....	228.0	[0..5]	[273..3]
gi\|78195313, gi\|... - gi\|78224058\|ref\|YP_385805.1\| NAD synthetase [Geobacter metallireducens GS-15], gi\|78195313\|gb\|ABB330...	228.0	[0..9]	[273..5]

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Predicted Domain #1

Region A:
Residues: [1-277]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPQNLHFDY GLVEAILVPF IRNEIRKFGF GSVVLGLSGG IDSAVVCELA VRALGVENVL  60
   61 ALMMPYKTSS QESLDHAELM VDRLGIRYEI MPVTEVVDAF FATRPDASRL RRGNVMARSR 120
  121 MLCLYDVSAR DGCLVLGTSN KTELMLGYGT MFGDMASAVN PIGDLYKTQI FGLARHLGIP 180
  181 APLIDKPPSA DLWEGQSDEA DLGFSYEEVD QLLYMMLEER MDRDAILAEG IDSAFYQRVR 240
  241 SMVVRNQYKR MMPVIAKLSS RTPGIDFRYA RDWQEVR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	54.69897
Match:	2e18A
Description:	No description for 2e18A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits