YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|21646146, gi\|...
Organism:	Chlorobium tepidum TLS
Length:	80 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21646146, gi|....

Description	E-value	Query Range	Subject Range
gi\|37198586, gi\|... - gi\|37679841\|ref\|NP_934450.1\| thiol-disulfide isomerase and thioredoxin [Vibrio vulnificus YJ016], gi...	98.0	[0..2]	[79..11]
gi\|21221752, gi\|... - gi\|5123666\|emb\|CAB45355.1\| putative redoxin [Streptomyces coelicolor A3(2)], gi\|21221752\|ref\|NP_6275... gi\|7481233 - pir\|\|T36269 probable redoxin - Streptomyces coelicolor	95.0	[0..3]	[80..22]
gi\|71368938, gi\|... - gi\|71368938\|ref\|ZP_00659415.1\| conserved hypothetical protein [Nocardioides sp. JS614], gi\|71155340\|...	94.0	[0..3]	[77..4]
gi\|29831280, gi\|... - gi\|29831280\|ref\|NP_825914.1\| redoxin [Streptomyces avermitilis MA-4680], gi\|29608395\|dbj\|BAC72449.1\|...	92.0	[0..3]	[77..20]
gi\|76660396 - gi\|76660396\|ref\|XP_871525.1\| PREDICTED: similar to CG9147-PB, isoform B [Bos taurus]	92.0	[0..2]	[77..65]
YD286_MOUSE - Glutaredoxin-like protein C5orf63 homolog OS=Mus musculus PE=1 SV=1	92.0	[0..2]	[78..29]
gi\|68232824, gi\|... - gi\|68232824\|ref\|ZP_00571962.1\| hypothetical protein Franean1DRAFT_2753 [Frankia sp. EAN1pec], gi\|681...	91.0	[0..5]	[79..79]
gi\|212288103, gi... - gi\|212288103\|sp\|A6NC05.2\|YD286_HUMAN RecName: Full=Glutaredoxin-like protein YDR286C homolog, gi\|119... gi\|114601454 - gi\|114601454\|ref\|XP_001158651.1\| PREDICTED: hypothetical protein LOC742209 isoform 2 [Pan troglodyte...	90.0	[0..2]	[77..30]
gi\|194563833, gi... - gi\|84361279\|ref\|ZP_00985956.1\| COG0526: Thiol-disulfide isomerase and thioredoxins [Burkholderia dol...	89.0	[0..6]	[80..3]

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Predicted Domain #1

Region A:
Residues: [1-80]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPQVTIYGK PECCLCDDAL KVLEAVRKRI PFDIEKRDIS GNADLIERYG LSIPVIFVDG  60
   61 KLAFKHRIDK ERLIALLKGQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	19.045757
Match:	1wjkA
Description:	Solution structure of hypothetical protein C330018D20Rik from Mus musculus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.142133664747919	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: